Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 SNX33P1-201ENST00000592116 1762 ntBASIC15.3■□□□□ 0.04
NR1H4Q96RI1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 FAM87A-204ENST00000613235 858 ntBASIC15.3■□□□□ 0.04
NR1H4Q96RI1 AL049757.1-201ENST00000616842 1596 ntBASIC15.3■□□□□ 0.04
NR1H4Q96RI1 PCGF3-213ENST00000620529 1899 ntBASIC15.3■□□□□ 0.04
NR1H4Q96RI1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 LINC01568-207ENST00000641790 1380 ntBASIC15.3■□□□□ 0.04
NR1H4Q96RI1 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 AP003680.1-201ENST00000598970 3660 ntBASIC15.3■□□□□ 0.04
NR1H4Q96RI1 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 AC107918.4-201ENST00000641966 3141 ntBASIC15.3■□□□□ 0.04
NR1H4Q96RI1 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.3■□□□□ 0.04
NR1H4Q96RI1 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.29■□□□□ 0.04
NR1H4Q96RI1 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 AC004263.2-201ENST00000617183 678 ntBASIC15.29■□□□□ 0.04
NR1H4Q96RI1 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 AC105250.1-201ENST00000509378 2057 ntBASIC15.29■□□□□ 0.04
NR1H4Q96RI1 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR1H4Q96RI1 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 C18orf15-201ENST00000623680 2534 ntBASIC15.28■□□□□ 0.04
NR1H4Q96RI1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 AC136759.1-202ENST00000530858 2194 ntBASIC15.28■□□□□ 0.04
NR1H4Q96RI1 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 MBLAC2-202ENST00000514906 1936 ntBASIC15.28■□□□□ 0.04
NR1H4Q96RI1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 AL157888.1-201ENST00000631930 593 ntBASIC15.28■□□□□ 0.04
NR1H4Q96RI1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NR1H4Q96RI1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms