Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 YBX2P1-201ENST00000394192 760 ntBASIC15.35■□□□□ 0.05
COL21A1Q96P44 AC002056.1-201ENST00000395613 760 ntBASIC15.35■□□□□ 0.05
COL21A1Q96P44 BX842568.4-201ENST00000421222 227 ntBASIC15.35■□□□□ 0.05
COL21A1Q96P44 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 AC109635.5-201ENST00000533593 962 ntBASIC15.35■□□□□ 0.05
COL21A1Q96P44 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 C20orf181-201ENST00000623918 480 ntBASIC15.34■□□□□ 0.05
COL21A1Q96P44 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.34■□□□□ 0.05
COL21A1Q96P44 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.34■□□□□ 0.05
COL21A1Q96P44 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
COL21A1Q96P44 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.34■□□□□ 0.05
COL21A1Q96P44 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL21A1Q96P44 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
COL21A1Q96P44 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
COL21A1Q96P44 AC144831.1-201ENST00000573312 2656 ntBASIC15.33■□□□□ 0.05
COL21A1Q96P44 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL21A1Q96P44 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COL21A1Q96P44 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 AC099063.4-201ENST00000641099 1602 ntBASIC15.33■□□□□ 0.04
COL21A1Q96P44 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL21A1Q96P44 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL21A1Q96P44 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL21A1Q96P44 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL21A1Q96P44 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
COL21A1Q96P44 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COL21A1Q96P44 AC092474.2-201ENST00000424288 719 ntBASIC15.33■□□□□ 0.04
COL21A1Q96P44 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.33■□□□□ 0.04
COL21A1Q96P44 FAM58CP-201ENST00000435741 640 ntBASIC15.33■□□□□ 0.04
COL21A1Q96P44 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms