Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 AC098859.1-201ENST00000502915 1238 ntBASIC18.89■□□□□ 0.61
TRIM47Q96LD4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 RNA5SP410-201ENST00000516285 106 ntBASIC18.89■□□□□ 0.61
TRIM47Q96LD4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.89■□□□□ 0.61
TRIM47Q96LD4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 MIR4525-201ENST00000580000 75 ntBASIC18.88■□□□□ 0.61
TRIM47Q96LD4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM47Q96LD4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 AC114501.2-201ENST00000439631 535 ntBASIC18.87■□□□□ 0.61
TRIM47Q96LD4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 AC055876.2-201ENST00000531834 546 ntBASIC18.87■□□□□ 0.61
TRIM47Q96LD4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 CTBP2P3-201ENST00000585629 1255 ntBASIC18.87■□□□□ 0.61
TRIM47Q96LD4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 AL603756.1-201ENST00000606511 2163 ntBASIC18.87■□□□□ 0.61
TRIM47Q96LD4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM47Q96LD4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms