Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 OR7E14P-202ENST00000530490 1290 ntBASIC15.61■□□□□ 0.09
VPS33AQ96AX1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 SSR4P1-203ENST00000599569 2260 ntBASIC15.61■□□□□ 0.09
VPS33AQ96AX1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 U82695.1-201ENST00000635752 1889 ntBASIC15.61■□□□□ 0.09
VPS33AQ96AX1 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS33AQ96AX1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.6■□□□□ 0.09
VPS33AQ96AX1 IGHV3-65-201ENST00000523210 341 ntBASIC15.6■□□□□ 0.09
VPS33AQ96AX1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 PRELID1P1-202ENST00000567272 903 ntBASIC15.6■□□□□ 0.09
VPS33AQ96AX1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 AC008677.1-201ENST00000519230 1561 ntBASIC15.6■□□□□ 0.09
VPS33AQ96AX1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
VPS33AQ96AX1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.59■□□□□ 0.09
VPS33AQ96AX1 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.59■□□□□ 0.09
VPS33AQ96AX1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms