Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 AL080243.2-201ENST00000418783 582 ntBASIC16.03■□□□□ 0.16
SCAMP4Q969E2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 TEX28P1-201ENST00000613479 1221 ntBASIC16.03■□□□□ 0.16
SCAMP4Q969E2 TEX28P2-201ENST00000617764 1221 ntBASIC16.03■□□□□ 0.16
SCAMP4Q969E2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAMP4Q969E2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 HAUS4P1-201ENST00000406739 1145 ntBASIC16.02■□□□□ 0.16
SCAMP4Q969E2 BASP1P1-201ENST00000430708 665 ntBASIC16.02■□□□□ 0.16
SCAMP4Q969E2 AC241585.1-201ENST00000433527 519 ntBASIC16.02■□□□□ 0.16
SCAMP4Q969E2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SCAMP4Q969E2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.02■□□□□ 0.15
SCAMP4Q969E2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 AC134407.2-201ENST00000625089 1978 ntBASIC16.02■□□□□ 0.15
SCAMP4Q969E2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.02■□□□□ 0.15
SCAMP4Q969E2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 CYP2T1P-202ENST00000641596 2535 ntBASIC16.01■□□□□ 0.15
SCAMP4Q969E2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.01■□□□□ 0.15
SCAMP4Q969E2 TSSK5P-201ENST00000423978 907 ntBASIC16.01■□□□□ 0.15
SCAMP4Q969E2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.01■□□□□ 0.15
SCAMP4Q969E2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCAMP4Q969E2 SPCS2P1-201ENST00000561636 679 ntBASIC16.01■□□□□ 0.15
SCAMP4Q969E2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms