Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC3Q92529 ALG1L8P-201ENST00000533887 760 ntBASIC17.21■□□□□ 0.35
SHC3Q92529 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC3Q92529 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.21■□□□□ 0.35
SHC3Q92529 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC3Q92529 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
SHC3Q92529 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.21■□□□□ 0.35
SHC3Q92529 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC3Q92529 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
SHC3Q92529 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
SHC3Q92529 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SHC3Q92529 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.21■□□□□ 0.34
SHC3Q92529 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.21■□□□□ 0.34
SHC3Q92529 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
SHC3Q92529 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.2■□□□□ 0.34
SHC3Q92529 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.2■□□□□ 0.34
SHC3Q92529 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SHC3Q92529 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.2■□□□□ 0.34
SHC3Q92529 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.2■□□□□ 0.34
SHC3Q92529 KRT18P32-201ENST00000424695 1287 ntBASIC17.2■□□□□ 0.34
SHC3Q92529 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.2■□□□□ 0.34
SHC3Q92529 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.2■□□□□ 0.34
SHC3Q92529 EEF1DP4-201ENST00000446006 880 ntBASIC17.2■□□□□ 0.34
SHC3Q92529 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.2■□□□□ 0.34
SHC3Q92529 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.2■□□□□ 0.34
SHC3Q92529 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.2■□□□□ 0.34
SHC3Q92529 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.2■□□□□ 0.34
SHC3Q92529 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.2■□□□□ 0.34
SHC3Q92529 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.2■□□□□ 0.34
SHC3Q92529 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.2■□□□□ 0.34
SHC3Q92529 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.2■□□□□ 0.34
SHC3Q92529 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
SHC3Q92529 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.2■□□□□ 0.34
SHC3Q92529 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SHC3Q92529 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.2■□□□□ 0.34
SHC3Q92529 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.2■□□□□ 0.34
SHC3Q92529 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SHC3Q92529 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC3Q92529 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.19■□□□□ 0.34
SHC3Q92529 CYP4F24P-201ENST00000586049 1580 ntBASIC17.19■□□□□ 0.34
SHC3Q92529 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.19■□□□□ 0.34
SHC3Q92529 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SHC3Q92529 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.19■□□□□ 0.34
SHC3Q92529 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SHC3Q92529 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SHC3Q92529 AL139010.1-201ENST00000454878 894 ntBASIC17.19■□□□□ 0.34
SHC3Q92529 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.19■□□□□ 0.34
SHC3Q92529 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SHC3Q92529 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.19■□□□□ 0.34
SHC3Q92529 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
SHC3Q92529 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.19■□□□□ 0.34
SHC3Q92529 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.19■□□□□ 0.34
SHC3Q92529 AC004835.2-201ENST00000603762 682 ntBASIC17.19■□□□□ 0.34
SHC3Q92529 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 AC009093.7-201ENST00000623853 1223 ntBASIC17.19■□□□□ 0.34
SHC3Q92529 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.19■□□□□ 0.34
SHC3Q92529 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms