Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.37■□□□□ 0.69
SNED1Q8TER0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SNED1Q8TER0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SNED1Q8TER0 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.37■□□□□ 0.69
SNED1Q8TER0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 MIR326-201ENST00000362220 95 ntBASIC19.37■□□□□ 0.69
SNED1Q8TER0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 POU5F1P6-201ENST00000466990 990 ntBASIC19.37■□□□□ 0.69
SNED1Q8TER0 AC025279.2-201ENST00000569730 653 ntBASIC19.37■□□□□ 0.69
SNED1Q8TER0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SNED1Q8TER0 AC005695.3-201ENST00000614522 232 ntBASIC19.37■□□□□ 0.69
SNED1Q8TER0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.37■□□□□ 0.69
SNED1Q8TER0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SNED1Q8TER0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SNED1Q8TER0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.37■□□□□ 0.69
SNED1Q8TER0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.37■□□□□ 0.69
SNED1Q8TER0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SNED1Q8TER0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SNED1Q8TER0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.37■□□□□ 0.69
SNED1Q8TER0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNED1Q8TER0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNED1Q8TER0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNED1Q8TER0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNED1Q8TER0 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNED1Q8TER0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 CALR4P-201ENST00000431943 946 ntBASIC19.36■□□□□ 0.69
SNED1Q8TER0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 AC015910.1-201ENST00000579400 975 ntBASIC19.36■□□□□ 0.69
SNED1Q8TER0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNED1Q8TER0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNED1Q8TER0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNED1Q8TER0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNED1Q8TER0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNED1Q8TER0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNED1Q8TER0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNED1Q8TER0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNED1Q8TER0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNED1Q8TER0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNED1Q8TER0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SNED1Q8TER0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.35■□□□□ 0.69
SNED1Q8TER0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
SNED1Q8TER0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.35■□□□□ 0.69
SNED1Q8TER0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SNED1Q8TER0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SNED1Q8TER0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.35■□□□□ 0.69
SNED1Q8TER0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.35■□□□□ 0.69
SNED1Q8TER0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 AL121723.1-201ENST00000445194 1519 ntBASIC19.35■□□□□ 0.69
SNED1Q8TER0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 UBALD1-205ENST00000590891 2641 ntBASIC19.35■□□□□ 0.69
SNED1Q8TER0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.35■□□□□ 0.69
SNED1Q8TER0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.35■□□□□ 0.69
SNED1Q8TER0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.35■□□□□ 0.69
SNED1Q8TER0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.35■□□□□ 0.69
SNED1Q8TER0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SNED1Q8TER0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms