Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 AC006277.1-201ENST00000624348 1610 ntBASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 AC142381.1-201ENST00000426099 345 ntBASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 AC069120.2-201ENST00000524091 540 ntBASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 AC073389.1-201ENST00000595595 795 ntBASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 AC013467.2-201ENST00000605472 835 ntBASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms