Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC21.04■□□□□ 0.96
COL22A1Q8NFW1 AC116345.2-201ENST00000512837 523 ntBASIC21.04■□□□□ 0.96
COL22A1Q8NFW1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC21.04■□□□□ 0.96
COL22A1Q8NFW1 YRDCP1-201ENST00000621419 643 ntBASIC21.04■□□□□ 0.96
COL22A1Q8NFW1 BX539320.1-201ENST00000623759 877 ntBASIC21.04■□□□□ 0.96
COL22A1Q8NFW1 CDK7-214ENST00000626796 358 ntTSL 5 BASIC21.04■□□□□ 0.96
COL22A1Q8NFW1 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC21.04■□□□□ 0.96
COL22A1Q8NFW1 HLA-C-210ENST00000640219 976 ntBASIC21.04■□□□□ 0.96
COL22A1Q8NFW1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL22A1Q8NFW1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC21.04■□□□□ 0.96
COL22A1Q8NFW1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 RGS5-214ENST00000429865 754 ntTSL 3 BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 AL161670.2-201ENST00000557650 1227 ntBASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 AC103988.2-201ENST00000561804 725 ntBASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 AC100757.4-201ENST00000626934 759 ntBASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL22A1Q8NFW1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 AC134407.2-201ENST00000625089 1978 ntBASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 KRT18P66-201ENST00000452970 1269 ntBASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 ZACNP1-201ENST00000612259 710 ntBASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 RN7SL736P-201ENST00000613111 269 ntBASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
COL22A1Q8NFW1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL22A1Q8NFW1 AC148477.4-201ENST00000613430 1793 ntBASIC21.02■□□□□ 0.95
COL22A1Q8NFW1 PCDHB18P-201ENST00000524813 2368 ntBASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 CEP164P1-201ENST00000455142 418 ntBASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 AC011491.1-203ENST00000637688 543 ntBASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC21.01■□□□□ 0.95
COL22A1Q8NFW1 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL22A1Q8NFW1 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL22A1Q8NFW1 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL22A1Q8NFW1 FAM8A4P-201ENST00000435433 1213 ntBASIC21■□□□□ 0.95
COL22A1Q8NFW1 HIST2H2BB-201ENST00000449108 381 ntBASIC21■□□□□ 0.95
COL22A1Q8NFW1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC21■□□□□ 0.95
COL22A1Q8NFW1 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
COL22A1Q8NFW1 AC106820.3-201ENST00000561653 397 ntBASIC21■□□□□ 0.95
COL22A1Q8NFW1 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC21■□□□□ 0.95
COL22A1Q8NFW1 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL22A1Q8NFW1 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL22A1Q8NFW1 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC21■□□□□ 0.95
COL22A1Q8NFW1 ENPP7P14-201ENST00000621765 1040 ntBASIC21■□□□□ 0.95
COL22A1Q8NFW1 AP001002.3-201ENST00000623482 206 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms