Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 HAUS4P1-201ENST00000406739 1145 ntBASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 AL513523.2-202ENST00000427283 2040 ntBASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 LINC02199-201ENST00000506655 2702 ntBASIC18.65■□□□□ 0.58
CCDC148Q8NFR7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CCDC148Q8NFR7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
CCDC148Q8NFR7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC148Q8NFR7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC148Q8NFR7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 AC026979.3-201ENST00000607315 403 ntBASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 MIR6080-201ENST00000617359 66 ntBASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC148Q8NFR7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms