Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LPCAT1Q8NF37 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LPCAT1Q8NF37 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LPCAT1Q8NF37 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
LPCAT1Q8NF37 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.33■□□□□ 0.21
LPCAT1Q8NF37 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LPCAT1Q8NF37 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 METTL21AP1-201ENST00000438852 635 ntBASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 AC004449.1-201ENST00000564240 433 ntBASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 AC003101.2-201ENST00000612557 442 ntBASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.33■□□□□ 0.2
LPCAT1Q8NF37 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 MIR648-201ENST00000385046 94 ntBASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 AL513523.2-202ENST00000427283 2040 ntBASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 KRT18P28-201ENST00000453838 1332 ntBASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 HLA-J-203ENST00000494367 1087 ntBASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 AC018529.1-201ENST00000613063 361 ntBASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 AP001059.3-201ENST00000619053 235 ntBASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 AC093028.1-201ENST00000622998 982 ntBASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LPCAT1Q8NF37 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 AC026691.1-201ENST00000602502 2017 ntBASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LPCAT1Q8NF37 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms