Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 HAUS4P1-201ENST00000406739 1145 ntBASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 AC254562.1-201ENST00000417586 456 ntBASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SRFBP1Q8NEF9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 AC069335.1-201ENST00000489972 472 ntBASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 RNA5SP410-201ENST00000516285 106 ntBASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 AC079781.4-201ENST00000641908 219 ntBASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SRFBP1Q8NEF9 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 PCDHA1-201ENST00000378133 2726 ntBASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 AC004461.1-201ENST00000412461 403 ntBASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SRFBP1Q8NEF9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms