Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 AL136379.1-201ENST00000623471 2642 ntBASIC14.19□□□□□ -0.14
CPEB3Q8NE35 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 SLC25A39P2-201ENST00000537614 270 ntBASIC14.19□□□□□ -0.14
CPEB3Q8NE35 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CPEB3Q8NE35 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 FAM58DP-201ENST00000428076 619 ntBASIC14.18□□□□□ -0.14
CPEB3Q8NE35 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 SNHG9-202ENST00000564014 471 ntBASIC14.18□□□□□ -0.14
CPEB3Q8NE35 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 AL691403.2-201ENST00000618460 490 ntBASIC14.18□□□□□ -0.14
CPEB3Q8NE35 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CPEB3Q8NE35 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.17□□□□□ -0.14
CPEB3Q8NE35 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 AL627223.1-201ENST00000416693 442 ntBASIC14.17□□□□□ -0.14
CPEB3Q8NE35 AC254562.1-201ENST00000417586 456 ntBASIC14.17□□□□□ -0.14
CPEB3Q8NE35 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms