Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 AD000864.1-201ENST00000624076 2295 ntBASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 EHF-205ENST00000527935 557 ntTSL 2 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 AC005695.3-201ENST00000614522 232 ntBASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 FAM86LP-201ENST00000478302 853 ntBASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 AC120045.2-201ENST00000567334 178 ntBASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFAP43Q8NDM7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 MIR6727-201ENST00000620702 65 ntBASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
CFAP43Q8NDM7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC24.79■■□□□ 1.56
CFAP43Q8NDM7 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC24.79■■□□□ 1.56
CFAP43Q8NDM7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
CFAP43Q8NDM7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC24.79■■□□□ 1.56
CFAP43Q8NDM7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC24.79■■□□□ 1.56
CFAP43Q8NDM7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CFAP43Q8NDM7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
CFAP43Q8NDM7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC24.79■■□□□ 1.56
CFAP43Q8NDM7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms