Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC116Q8IYX3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC116Q8IYX3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC116Q8IYX3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC116Q8IYX3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC116Q8IYX3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC116Q8IYX3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 SPCS2P4-201ENST00000436160 681 ntBASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 DNAJB3-201ENST00000446806 729 ntBASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 AC098859.1-201ENST00000502915 1238 ntBASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 PRAL-201ENST00000624952 3286 ntBASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 ELL2P1-201ENST00000413990 1906 ntBASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 CICP6-201ENST00000457191 2729 ntBASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC116Q8IYX3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 AC022188.1-201ENST00000620960 1664 ntBASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 IGHV3-62-201ENST00000520057 340 ntBASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 MIR3687-2-201ENST00000577708 61 ntBASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 MIR3687-1-201ENST00000614492 61 ntBASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms