Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 AL080243.2-201ENST00000418783 582 ntBASIC17.15■□□□□ 0.34
RNF135Q8IUD6 MYCLP2-201ENST00000449268 967 ntBASIC17.15■□□□□ 0.34
RNF135Q8IUD6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 AL079307.3-201ENST00000556114 283 ntBASIC17.15■□□□□ 0.34
RNF135Q8IUD6 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 AL021920.2-201ENST00000624828 1351 ntBASIC17.15■□□□□ 0.34
RNF135Q8IUD6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
RNF135Q8IUD6 PCDHA14-201ENST00000506751 2298 ntBASIC17.14■□□□□ 0.33
RNF135Q8IUD6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 AC055876.2-201ENST00000531834 546 ntBASIC17.14■□□□□ 0.33
RNF135Q8IUD6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 AC105021.1-202ENST00000570572 669 ntBASIC17.14■□□□□ 0.33
RNF135Q8IUD6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 TOP3BP1-201ENST00000420768 1380 ntBASIC17.14■□□□□ 0.33
RNF135Q8IUD6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF135Q8IUD6 RNF216P1-203ENST00000404404 2427 ntBASIC17.13■□□□□ 0.33
RNF135Q8IUD6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 KRT8P49-201ENST00000604166 1432 ntBASIC17.13■□□□□ 0.33
RNF135Q8IUD6 FLJ38576-201ENST00000623820 2459 ntBASIC17.13■□□□□ 0.33
RNF135Q8IUD6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 RN7SL618P-201ENST00000477850 296 ntBASIC17.13■□□□□ 0.33
RNF135Q8IUD6 SPDYE18-201ENST00000510091 1050 ntBASIC17.13■□□□□ 0.33
RNF135Q8IUD6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 BANF1P1-201ENST00000553684 263 ntBASIC17.13■□□□□ 0.33
RNF135Q8IUD6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 CTBP2P3-201ENST00000585629 1255 ntBASIC17.13■□□□□ 0.33
RNF135Q8IUD6 AL133215.2-201ENST00000609242 977 ntBASIC17.13■□□□□ 0.33
RNF135Q8IUD6 MIR6869-201ENST00000619434 62 ntBASIC17.13■□□□□ 0.33
RNF135Q8IUD6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms