Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 AC022532.1-201ENST00000624563 1728 ntBASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD1LQ86WJ1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 AL691432.1-201ENST00000596308 1422 ntBASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 RN7SL589P-201ENST00000481268 310 ntBASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 AC024267.1-201ENST00000582320 895 ntBASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 AC026120.1-201ENST00000611536 926 ntBASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 PPT1-215ENST00000641471 2368 ntBASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CHD1LQ86WJ1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 YBX2P1-201ENST00000394192 760 ntBASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 AL022342.1-201ENST00000400363 863 ntBASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 AC004832.2-201ENST00000426397 482 ntBASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 AC079140.1-201ENST00000508039 487 ntBASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 AP000842.3-202ENST00000569238 1080 ntBASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 AL671883.3-201ENST00000603274 991 ntBASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CHD1LQ86WJ1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CHD1LQ86WJ1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
CHD1LQ86WJ1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHD1LQ86WJ1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.93■□□□□ 0.78
CHD1LQ86WJ1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 664.7 ms