Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 SERBP1P3-201ENST00000459980 809 ntBASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 INGX-202ENST00000489074 768 ntBASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 SPCS2P1-201ENST00000561636 679 ntBASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 KRT8P12-202ENST00000472924 1397 ntBASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 AL596087.1-201ENST00000400979 1969 ntBASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM4Q86VH4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRTM4Q86VH4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRTM4Q86VH4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.83■□□□□ 0.13
LRRTM4Q86VH4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRTM4Q86VH4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRTM4Q86VH4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRRTM4Q86VH4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRRTM4Q86VH4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRTM4Q86VH4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.13
LRRTM4Q86VH4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.13
LRRTM4Q86VH4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 AL118508.1-201ENST00000613502 2345 ntBASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 AC004987.2-201ENST00000395959 1148 ntBASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 AL096865.1-201ENST00000606796 927 ntBASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 AC006449.5-201ENST00000610658 2098 ntBASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 AP001282.1-201ENST00000531301 1499 ntBASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM4Q86VH4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms