Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 NUP210P1-202ENST00000504322 710 ntBASIC13.37□□□□□ -0.27
CSMD2Q7Z408 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 YRDCP1-201ENST00000621419 643 ntBASIC13.37□□□□□ -0.27
CSMD2Q7Z408 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD2Q7Z408 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 ECM1P1-201ENST00000604092 1279 ntBASIC13.36□□□□□ -0.27
CSMD2Q7Z408 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 AC074338.1-201ENST00000416825 156 ntBASIC13.36□□□□□ -0.27
CSMD2Q7Z408 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 MIR3147-201ENST00000577811 66 ntBASIC13.36□□□□□ -0.27
CSMD2Q7Z408 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSMD2Q7Z408 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 FO393414.2-201ENST00000405153 598 ntBASIC13.35□□□□□ -0.27
CSMD2Q7Z408 KRT18P64-201ENST00000434946 1219 ntBASIC13.35□□□□□ -0.27
CSMD2Q7Z408 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 EEF1DP4-201ENST00000446006 880 ntBASIC13.35□□□□□ -0.27
CSMD2Q7Z408 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 AL023775.1-201ENST00000454907 1746 ntBASIC13.35□□□□□ -0.27
CSMD2Q7Z408 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 ACTG1P2-201ENST00000415776 1125 ntBASIC13.35□□□□□ -0.27
CSMD2Q7Z408 ACTG1P11-201ENST00000425411 1125 ntBASIC13.35□□□□□ -0.27
CSMD2Q7Z408 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 SERPINA13P-202ENST00000478994 924 ntBASIC13.35□□□□□ -0.27
CSMD2Q7Z408 CTBP2P4-201ENST00000513884 920 ntBASIC13.35□□□□□ -0.27
CSMD2Q7Z408 AC026410.3-201ENST00000514280 936 ntBASIC13.35□□□□□ -0.27
CSMD2Q7Z408 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 AC006453.4-201ENST00000636949 1252 ntBASIC13.35□□□□□ -0.27
CSMD2Q7Z408 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.35□□□□□ -0.27
CSMD2Q7Z408 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms