Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 MYO15B-237ENST00000642007 4893 ntBASIC10.8□□□□□ -0.68
SCXQ7RTU7 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 AC144831.1-201ENST00000573312 2656 ntBASIC10.8□□□□□ -0.68
SCXQ7RTU7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 AL645939.2-201ENST00000427340 991 ntBASIC10.8□□□□□ -0.68
SCXQ7RTU7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 NMU-203ENST00000507338 658 ntTSL 3 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 REXO1L3P-201ENST00000622202 1288 ntBASIC10.8□□□□□ -0.68
SCXQ7RTU7 AC093028.1-201ENST00000622998 982 ntBASIC10.8□□□□□ -0.68
SCXQ7RTU7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 AL513210.1-201ENST00000629608 234 ntBASIC10.8□□□□□ -0.68
SCXQ7RTU7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC10.79□□□□□ -0.68
SCXQ7RTU7 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCXQ7RTU7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
SCXQ7RTU7 PCDHA3-202ENST00000532566 4594 ntBASIC10.79□□□□□ -0.68
SCXQ7RTU7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms