Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 MIR346-201ENST00000362234 95 ntBASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 TFAMP1-201ENST00000412727 736 ntBASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 MKNK2P1-201ENST00000437526 628 ntBASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 MTDHP5-201ENST00000598980 586 ntBASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NHLRC1Q6VVB1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 AC084121.4-201ENST00000641598 221 ntBASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 AF228730.8-201ENST00000642140 221 ntBASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
NHLRC1Q6VVB1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 AP002414.2-201ENST00000591780 3365 ntBASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 NFIC-211ENST00000641145 8399 ntBASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms