Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 MEP1AP4-201ENST00000423244 1087 ntBASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 INE1-201ENST00000456273 945 ntBASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 AC074044.1-201ENST00000609673 707 ntBASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 AC007431.3-201ENST00000623221 587 ntBASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 AL691432.1-201ENST00000596308 1422 ntBASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC62Q6P9F0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 PKD1P5-201ENST00000532415 10291 ntBASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 AP006294.1-201ENST00000415407 339 ntBASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC62Q6P9F0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC62Q6P9F0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms