Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 AC005622.1-201ENST00000636801 1703 ntBASIC15.31■□□□□ 0.04
LPCAT4Q643R3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.31■□□□□ 0.04
LPCAT4Q643R3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 RN7SL606P-201ENST00000472779 293 ntBASIC15.3■□□□□ 0.04
LPCAT4Q643R3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 VENTXP5-201ENST00000523979 775 ntBASIC15.3■□□□□ 0.04
LPCAT4Q643R3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 LINC01568-207ENST00000641790 1380 ntBASIC15.3■□□□□ 0.04
LPCAT4Q643R3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 PCDHA3-202ENST00000532566 4594 ntBASIC15.3■□□□□ 0.04
LPCAT4Q643R3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 AC010327.5-201ENST00000586923 3061 ntBASIC15.3■□□□□ 0.04
LPCAT4Q643R3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.3■□□□□ 0.04
LPCAT4Q643R3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 KRT18P22-201ENST00000402024 1347 ntBASIC15.29■□□□□ 0.04
LPCAT4Q643R3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 AC124864.1-201ENST00000623408 392 ntBASIC15.29■□□□□ 0.04
LPCAT4Q643R3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 AC107918.4-201ENST00000641966 3141 ntBASIC15.29■□□□□ 0.04
LPCAT4Q643R3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LPCAT4Q643R3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms