Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 AL591424.1-201ENST00000442569 1213 ntBASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 CXCL1P1-201ENST00000502804 216 ntBASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 AC013467.2-201ENST00000605472 835 ntBASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 AC096734.2-201ENST00000562054 433 ntBASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 MPDU1-223ENST00000582151 728 ntBASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATPAF1Q5TC12 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 HCG4-201ENST00000418983 998 ntBASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 RHOQP3-201ENST00000437982 621 ntBASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 SLC25A1P1-201ENST00000528351 927 ntBASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ATPAF1Q5TC12 MIR4492-201ENST00000581627 80 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms