Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
CCDC27Q2M243 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC27Q2M243 FLII-221ENST00000578558 2377 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC27Q2M243 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC27Q2M243 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
CCDC27Q2M243 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC27Q2M243 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CCDC27Q2M243 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC27Q2M243 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC27Q2M243 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC27Q2M243 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC27Q2M243 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC27Q2M243 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC27Q2M243 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC27Q2M243 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC27Q2M243 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC27Q2M243 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCDC27Q2M243 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CCDC27Q2M243 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC27Q2M243 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCDC27Q2M243 RAC2-202ENST00000401529 569 ntTSL 4 BASIC20.94■□□□□ 0.94
CCDC27Q2M243 PMS2P2-201ENST00000425039 1128 ntBASIC20.94■□□□□ 0.94
CCDC27Q2M243 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC27Q2M243 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC27Q2M243 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC27Q2M243 AC073592.8-201ENST00000624126 511 ntBASIC20.94■□□□□ 0.94
CCDC27Q2M243 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC27Q2M243 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC27Q2M243 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC27Q2M243 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC27Q2M243 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC27Q2M243 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC27Q2M243 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC27Q2M243 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC27Q2M243 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC27Q2M243 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC27Q2M243 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC27Q2M243 LINC02199-201ENST00000506655 2702 ntBASIC20.93■□□□□ 0.94
CCDC27Q2M243 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC27Q2M243 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC27Q2M243 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC27Q2M243 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC27Q2M243 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.93■□□□□ 0.94
CCDC27Q2M243 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC27Q2M243 AC097493.3-201ENST00000509725 367 ntBASIC20.93■□□□□ 0.94
CCDC27Q2M243 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.93■□□□□ 0.94
CCDC27Q2M243 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.93■□□□□ 0.94
CCDC27Q2M243 RFPL4AP1-201ENST00000530883 850 ntBASIC20.93■□□□□ 0.94
CCDC27Q2M243 MIR4313-201ENST00000580760 101 ntBASIC20.93■□□□□ 0.94
CCDC27Q2M243 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC27Q2M243 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC27Q2M243 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC27Q2M243 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC27Q2M243 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC27Q2M243 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC27Q2M243 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC27Q2M243 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC27Q2M243 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC27Q2M243 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC27Q2M243 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC27Q2M243 AC018892.3-201ENST00000623986 2499 ntBASIC20.93■□□□□ 0.94
CCDC27Q2M243 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC27Q2M243 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC27Q2M243 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC27Q2M243 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC27Q2M243 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC27Q2M243 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC27Q2M243 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC27Q2M243 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC27Q2M243 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC27Q2M243 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC27Q2M243 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC27Q2M243 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC27Q2M243 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC27Q2M243 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC27Q2M243 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCDC27Q2M243 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms