Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RSPO4Q2I0M5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 AL671710.1-201ENST00000610245 2349 ntBASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 Z97205.2-201ENST00000564697 1639 ntBASIC15.54■□□□□ 0.08
RSPO4Q2I0M5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 MIR769-201ENST00000390225 118 ntBASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 CYP46A4P-201ENST00000414953 267 ntBASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 AL451050.2-201ENST00000606967 682 ntBASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 AC108860.2-201ENST00000562760 2183 ntBASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RSPO4Q2I0M5 AC139713.2-201ENST00000641328 2723 ntBASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms