Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 AC036164.1-201ENST00000570544 333 ntBASIC19.22■□□□□ 0.67
PDS5AQ29RF7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDS5AQ29RF7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 AL512384.1-201ENST00000406683 331 ntBASIC19.21■□□□□ 0.67
PDS5AQ29RF7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 INE1-201ENST00000456273 945 ntBASIC19.21■□□□□ 0.67
PDS5AQ29RF7 RN7SL752P-201ENST00000463779 287 ntBASIC19.21■□□□□ 0.67
PDS5AQ29RF7 RN7SL399P-201ENST00000471648 279 ntBASIC19.21■□□□□ 0.67
PDS5AQ29RF7 AC011495.1-201ENST00000498085 584 ntBASIC19.21■□□□□ 0.67
PDS5AQ29RF7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 AC092552.1-201ENST00000547243 906 ntBASIC19.21■□□□□ 0.67
PDS5AQ29RF7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.21■□□□□ 0.67
PDS5AQ29RF7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.21■□□□□ 0.66
PDS5AQ29RF7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.2■□□□□ 0.66
PDS5AQ29RF7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 AL442647.2-201ENST00000429864 857 ntBASIC19.19■□□□□ 0.66
PDS5AQ29RF7 KRT18P64-201ENST00000434946 1219 ntBASIC19.19■□□□□ 0.66
PDS5AQ29RF7 U91328.1-201ENST00000437528 223 ntBASIC19.19■□□□□ 0.66
PDS5AQ29RF7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 WFDC1-204ENST00000613603 549 ntBASIC19.19■□□□□ 0.66
PDS5AQ29RF7 MIR8072-201ENST00000614241 80 ntBASIC19.19■□□□□ 0.66
PDS5AQ29RF7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms