Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.24■□□□□ 0.99
COL16A1Q07092 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC21.24■□□□□ 0.99
COL16A1Q07092 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC21.24■□□□□ 0.99
COL16A1Q07092 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC21.24■□□□□ 0.99
COL16A1Q07092 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL16A1Q07092 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL16A1Q07092 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL16A1Q07092 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL16A1Q07092 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.24■□□□□ 0.99
COL16A1Q07092 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL16A1Q07092 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL16A1Q07092 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL16A1Q07092 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL16A1Q07092 OS9-205ENST00000413095 1660 ntTSL 2 BASIC21.23■□□□□ 0.99
COL16A1Q07092 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL16A1Q07092 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL16A1Q07092 AC106794.1-201ENST00000506935 792 ntBASIC21.23■□□□□ 0.99
COL16A1Q07092 MARK2P5-201ENST00000507649 634 ntBASIC21.23■□□□□ 0.99
COL16A1Q07092 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC21.23■□□□□ 0.99
COL16A1Q07092 UBL5-208ENST00000593087 320 ntTSL 3 BASIC21.23■□□□□ 0.99
COL16A1Q07092 AC020922.3-201ENST00000595064 547 ntBASIC21.23■□□□□ 0.99
COL16A1Q07092 AL805961.1-201ENST00000642026 753 ntBASIC21.23■□□□□ 0.99
COL16A1Q07092 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL16A1Q07092 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL16A1Q07092 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
COL16A1Q07092 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL16A1Q07092 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL16A1Q07092 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL16A1Q07092 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC21.22■□□□□ 0.99
COL16A1Q07092 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 SERF2-206ENST00000409291 807 ntTSL 3 BASIC21.22■□□□□ 0.99
COL16A1Q07092 PHKG1P2-201ENST00000457537 863 ntBASIC21.22■□□□□ 0.99
COL16A1Q07092 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC21.22■□□□□ 0.99
COL16A1Q07092 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 IGHV3-37-201ENST00000518544 340 ntBASIC21.22■□□□□ 0.99
COL16A1Q07092 CSH2-206ENST00000560142 749 ntTSL 5 BASIC21.22■□□□□ 0.99
COL16A1Q07092 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.22■□□□□ 0.99
COL16A1Q07092 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC21.22■□□□□ 0.99
COL16A1Q07092 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.22■□□□□ 0.99
COL16A1Q07092 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
COL16A1Q07092 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.22■□□□□ 0.99
COL16A1Q07092 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
COL16A1Q07092 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.22■□□□□ 0.99
COL16A1Q07092 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
COL16A1Q07092 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC21.22■□□□□ 0.99
COL16A1Q07092 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC21.22■□□□□ 0.99
COL16A1Q07092 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL16A1Q07092 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC21.22■□□□□ 0.99
COL16A1Q07092 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC21.22■□□□□ 0.99
COL16A1Q07092 ZACNP1-201ENST00000612259 710 ntBASIC21.22■□□□□ 0.99
COL16A1Q07092 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
COL16A1Q07092 CYP51A1P3-201ENST00000400072 1428 ntBASIC21.22■□□□□ 0.99
COL16A1Q07092 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
COL16A1Q07092 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL16A1Q07092 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL16A1Q07092 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
COL16A1Q07092 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL16A1Q07092 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
COL16A1Q07092 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL16A1Q07092 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL16A1Q07092 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
COL16A1Q07092 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC21.21■□□□□ 0.99
COL16A1Q07092 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
COL16A1Q07092 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.21■□□□□ 0.99
COL16A1Q07092 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.21■□□□□ 0.99
COL16A1Q07092 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC21.21■□□□□ 0.99
COL16A1Q07092 FAM8A4P-201ENST00000435433 1213 ntBASIC21.21■□□□□ 0.99
COL16A1Q07092 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL16A1Q07092 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
COL16A1Q07092 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC21.21■□□□□ 0.99
COL16A1Q07092 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC21.21■□□□□ 0.99
COL16A1Q07092 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
COL16A1Q07092 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.21■□□□□ 0.99
COL16A1Q07092 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.21■□□□□ 0.99
COL16A1Q07092 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
COL16A1Q07092 REXO1L1P-202ENST00000608646 1974 ntBASIC21.2■□□□□ 0.98
COL16A1Q07092 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC21.2■□□□□ 0.98
COL16A1Q07092 AC148477.4-201ENST00000613430 1793 ntBASIC21.2■□□□□ 0.98
COL16A1Q07092 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC21.2■□□□□ 0.98
COL16A1Q07092 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL16A1Q07092 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC21.2■□□□□ 0.98
COL16A1Q07092 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
COL16A1Q07092 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
COL16A1Q07092 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL16A1Q07092 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms