Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDR2Q01850 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDR2Q01850 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.27■□□□□ 0.36
CDR2Q01850 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.27■□□□□ 0.36
CDR2Q01850 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDR2Q01850 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDR2Q01850 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.27■□□□□ 0.35
CDR2Q01850 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDR2Q01850 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CDR2Q01850 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.27■□□□□ 0.35
CDR2Q01850 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDR2Q01850 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
CDR2Q01850 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDR2Q01850 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.27■□□□□ 0.35
CDR2Q01850 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.27■□□□□ 0.35
CDR2Q01850 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDR2Q01850 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDR2Q01850 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.26■□□□□ 0.35
CDR2Q01850 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDR2Q01850 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.26■□□□□ 0.35
CDR2Q01850 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.26■□□□□ 0.35
CDR2Q01850 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CDR2Q01850 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.26■□□□□ 0.35
CDR2Q01850 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.26■□□□□ 0.35
CDR2Q01850 AC243562.1-201ENST00000560672 389 ntBASIC17.26■□□□□ 0.35
CDR2Q01850 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDR2Q01850 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.26■□□□□ 0.35
CDR2Q01850 C20orf181-201ENST00000623918 480 ntBASIC17.26■□□□□ 0.35
CDR2Q01850 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.26■□□□□ 0.35
CDR2Q01850 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.26■□□□□ 0.35
CDR2Q01850 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDR2Q01850 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
CDR2Q01850 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.26■□□□□ 0.35
CDR2Q01850 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.26■□□□□ 0.35
CDR2Q01850 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDR2Q01850 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDR2Q01850 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CDR2Q01850 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.25■□□□□ 0.35
CDR2Q01850 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CDR2Q01850 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.25■□□□□ 0.35
CDR2Q01850 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.25■□□□□ 0.35
CDR2Q01850 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.25■□□□□ 0.35
CDR2Q01850 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 YBX2P1-201ENST00000394192 760 ntBASIC17.25■□□□□ 0.35
CDR2Q01850 AC142381.1-201ENST00000426099 345 ntBASIC17.25■□□□□ 0.35
CDR2Q01850 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.25■□□□□ 0.35
CDR2Q01850 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CDR2Q01850 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.25■□□□□ 0.35
CDR2Q01850 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.25■□□□□ 0.35
CDR2Q01850 AC061975.2-201ENST00000581722 295 ntBASIC17.25■□□□□ 0.35
CDR2Q01850 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.25■□□□□ 0.35
CDR2Q01850 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.25■□□□□ 0.35
CDR2Q01850 AL671883.3-201ENST00000603274 991 ntBASIC17.25■□□□□ 0.35
CDR2Q01850 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.25■□□□□ 0.35
CDR2Q01850 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CDR2Q01850 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CDR2Q01850 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.25■□□□□ 0.35
CDR2Q01850 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.25■□□□□ 0.35
CDR2Q01850 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDR2Q01850 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDR2Q01850 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms