Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CDKL1Q00532 AL603832.2-201ENST00000566195 2125 ntBASIC15.97■□□□□ 0.15
CDKL1Q00532 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDKL1Q00532 AP002414.2-201ENST00000591780 3365 ntBASIC15.96■□□□□ 0.15
CDKL1Q00532 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.96■□□□□ 0.15
CDKL1Q00532 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.96■□□□□ 0.15
CDKL1Q00532 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDKL1Q00532 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.96■□□□□ 0.15
CDKL1Q00532 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.96■□□□□ 0.15
CDKL1Q00532 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 AC073439.1-201ENST00000624121 1774 ntBASIC15.96■□□□□ 0.15
CDKL1Q00532 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.96■□□□□ 0.15
CDKL1Q00532 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.96■□□□□ 0.15
CDKL1Q00532 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.96■□□□□ 0.15
CDKL1Q00532 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.96■□□□□ 0.15
CDKL1Q00532 AC099522.2-201ENST00000607001 744 ntBASIC15.96■□□□□ 0.15
CDKL1Q00532 AL365330.1-201ENST00000607459 531 ntBASIC15.96■□□□□ 0.15
CDKL1Q00532 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.96■□□□□ 0.15
CDKL1Q00532 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CDKL1Q00532 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
CDKL1Q00532 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.96■□□□□ 0.15
CDKL1Q00532 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDKL1Q00532 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CDKL1Q00532 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.96■□□□□ 0.14
CDKL1Q00532 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDKL1Q00532 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CDKL1Q00532 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
CDKL1Q00532 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDKL1Q00532 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.95■□□□□ 0.14
CDKL1Q00532 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CDKL1Q00532 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.95■□□□□ 0.14
CDKL1Q00532 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.95■□□□□ 0.14
CDKL1Q00532 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDKL1Q00532 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.95■□□□□ 0.14
CDKL1Q00532 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.95■□□□□ 0.14
CDKL1Q00532 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.95■□□□□ 0.14
CDKL1Q00532 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.95■□□□□ 0.14
CDKL1Q00532 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.95■□□□□ 0.14
CDKL1Q00532 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.95■□□□□ 0.14
CDKL1Q00532 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.95■□□□□ 0.14
CDKL1Q00532 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.95■□□□□ 0.14
CDKL1Q00532 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDKL1Q00532 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDKL1Q00532 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDKL1Q00532 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.95■□□□□ 0.14
CDKL1Q00532 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.95■□□□□ 0.14
CDKL1Q00532 AKAP8P1-201ENST00000434743 1349 ntBASIC15.94■□□□□ 0.14
CDKL1Q00532 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.94■□□□□ 0.14
CDKL1Q00532 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.94■□□□□ 0.14
CDKL1Q00532 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CDKL1Q00532 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDKL1Q00532 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
CDKL1Q00532 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDKL1Q00532 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.94■□□□□ 0.14
CDKL1Q00532 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.94■□□□□ 0.14
CDKL1Q00532 AC245100.5-201ENST00000452108 331 ntBASIC15.94■□□□□ 0.14
CDKL1Q00532 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.94■□□□□ 0.14
CDKL1Q00532 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.94■□□□□ 0.14
CDKL1Q00532 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDKL1Q00532 AC040169.1-201ENST00000565382 521 ntBASIC15.94■□□□□ 0.14
CDKL1Q00532 RARRES2P8-201ENST00000566335 367 ntBASIC15.94■□□□□ 0.14
CDKL1Q00532 AC002347.1-201ENST00000569543 541 ntBASIC15.94■□□□□ 0.14
CDKL1Q00532 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.94■□□□□ 0.14
CDKL1Q00532 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDKL1Q00532 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDKL1Q00532 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.94■□□□□ 0.14
CDKL1Q00532 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms