Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.25■□□□□ 0.19
AP1S1P61966 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
AP1S1P61966 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.25■□□□□ 0.19
AP1S1P61966 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 AL080243.2-201ENST00000418783 582 ntBASIC16.25■□□□□ 0.19
AP1S1P61966 AC055876.3-201ENST00000431496 288 ntBASIC16.25■□□□□ 0.19
AP1S1P61966 EEF1DP4-201ENST00000446006 880 ntBASIC16.25■□□□□ 0.19
AP1S1P61966 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.25■□□□□ 0.19
AP1S1P61966 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
AP1S1P61966 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.25■□□□□ 0.19
AP1S1P61966 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.25■□□□□ 0.19
AP1S1P61966 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.25■□□□□ 0.19
AP1S1P61966 AC138649.4-201ENST00000612222 287 ntBASIC16.25■□□□□ 0.19
AP1S1P61966 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.25■□□□□ 0.19
AP1S1P61966 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
AP1S1P61966 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP1S1P61966 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.25■□□□□ 0.19
AP1S1P61966 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.25■□□□□ 0.19
AP1S1P61966 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
AP1S1P61966 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.24■□□□□ 0.19
AP1S1P61966 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 AL513523.2-202ENST00000427283 2040 ntBASIC16.24■□□□□ 0.19
AP1S1P61966 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.24■□□□□ 0.19
AP1S1P61966 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.24■□□□□ 0.19
AP1S1P61966 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
AP1S1P61966 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
AP1S1P61966 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.24■□□□□ 0.19
AP1S1P61966 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
AP1S1P61966 AC092580.3-201ENST00000430932 139 ntBASIC16.24■□□□□ 0.19
AP1S1P61966 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 SERBP1P3-201ENST00000459980 809 ntBASIC16.24■□□□□ 0.19
AP1S1P61966 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.24■□□□□ 0.19
AP1S1P61966 AC097493.3-201ENST00000509725 367 ntBASIC16.24■□□□□ 0.19
AP1S1P61966 IGHV3-42-201ENST00000520410 361 ntBASIC16.24■□□□□ 0.19
AP1S1P61966 AC027369.6-201ENST00000525520 931 ntBASIC16.24■□□□□ 0.19
AP1S1P61966 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.24■□□□□ 0.19
AP1S1P61966 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
AP1S1P61966 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.24■□□□□ 0.19
AP1S1P61966 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.24■□□□□ 0.19
AP1S1P61966 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
AP1S1P61966 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.24■□□□□ 0.19
AP1S1P61966 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
AP1S1P61966 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.24■□□□□ 0.19
AP1S1P61966 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP1S1P61966 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.23■□□□□ 0.19
AP1S1P61966 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
AP1S1P61966 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.23■□□□□ 0.19
AP1S1P61966 AC069224.1-201ENST00000566372 1715 ntBASIC16.23■□□□□ 0.19
AP1S1P61966 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 BNIP3P1-202ENST00000550043 1585 ntBASIC16.23■□□□□ 0.19
AP1S1P61966 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 RPL37AP1-201ENST00000412502 279 ntBASIC16.23■□□□□ 0.19
AP1S1P61966 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.23■□□□□ 0.19
AP1S1P61966 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.23■□□□□ 0.19
AP1S1P61966 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.23■□□□□ 0.19
AP1S1P61966 TEX28P1-201ENST00000613479 1221 ntBASIC16.23■□□□□ 0.19
AP1S1P61966 TEX28P2-201ENST00000617764 1221 ntBASIC16.23■□□□□ 0.19
AP1S1P61966 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.23■□□□□ 0.19
AP1S1P61966 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.23■□□□□ 0.19
AP1S1P61966 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 AC011477.6-201ENST00000604980 1927 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms