Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CLDN6P56747 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CLDN6P56747 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CLDN6P56747 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN6P56747 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CLDN6P56747 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
CLDN6P56747 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN6P56747 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
CLDN6P56747 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.47■□□□□ 0.07
CLDN6P56747 AC099336.1-201ENST00000417053 1171 ntBASIC15.47■□□□□ 0.07
CLDN6P56747 HIST3H2BA-201ENST00000436555 524 ntBASIC15.47■□□□□ 0.07
CLDN6P56747 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDN6P56747 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN6P56747 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CLDN6P56747 AL583810.1-201ENST00000553344 1045 ntBASIC15.47■□□□□ 0.07
CLDN6P56747 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.47■□□□□ 0.07
CLDN6P56747 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.47■□□□□ 0.07
CLDN6P56747 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN6P56747 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDN6P56747 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CLDN6P56747 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.47■□□□□ 0.07
CLDN6P56747 KRT8P44-201ENST00000441609 1350 ntBASIC15.47■□□□□ 0.07
CLDN6P56747 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.47■□□□□ 0.07
CLDN6P56747 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.47■□□□□ 0.07
CLDN6P56747 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLDN6P56747 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CLDN6P56747 GPAA1P2-202ENST00000606848 1787 ntBASIC15.47■□□□□ 0.07
CLDN6P56747 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN6P56747 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDN6P56747 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN6P56747 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN6P56747 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.46■□□□□ 0.07
CLDN6P56747 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CLDN6P56747 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN6P56747 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN6P56747 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN6P56747 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN6P56747 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.46■□□□□ 0.07
CLDN6P56747 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.46■□□□□ 0.07
CLDN6P56747 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.46■□□□□ 0.07
CLDN6P56747 AC104596.2-201ENST00000512793 793 ntBASIC15.46■□□□□ 0.07
CLDN6P56747 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.46■□□□□ 0.07
CLDN6P56747 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.46■□□□□ 0.07
CLDN6P56747 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.46■□□□□ 0.07
CLDN6P56747 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.46■□□□□ 0.07
CLDN6P56747 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN6P56747 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.46■□□□□ 0.07
CLDN6P56747 AC015936.2-201ENST00000593177 259 ntBASIC15.46■□□□□ 0.07
CLDN6P56747 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLDN6P56747 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CLDN6P56747 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLDN6P56747 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CLDN6P56747 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CLDN6P56747 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.46■□□□□ 0.06
CLDN6P56747 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.46■□□□□ 0.06
CLDN6P56747 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLDN6P56747 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CLDN6P56747 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLDN6P56747 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
CLDN6P56747 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLDN6P56747 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CLDN6P56747 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CLDN6P56747 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.45■□□□□ 0.06
CLDN6P56747 BCYRN1-201ENST00000418539 200 ntBASIC15.45■□□□□ 0.06
CLDN6P56747 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN6P56747 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.45■□□□□ 0.06
CLDN6P56747 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.45■□□□□ 0.06
CLDN6P56747 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms