Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH8P55286 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH8P55286 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH8P55286 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH8P55286 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH8P55286 TNRC18P3-201ENST00000441896 2691 ntBASIC17.23■□□□□ 0.35
CDH8P55286 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH8P55286 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH8P55286 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.23■□□□□ 0.35
CDH8P55286 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH8P55286 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH8P55286 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CDH8P55286 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH8P55286 AC245100.5-201ENST00000452108 331 ntBASIC17.23■□□□□ 0.35
CDH8P55286 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH8P55286 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDH8P55286 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.23■□□□□ 0.35
CDH8P55286 AC005498.2-205ENST00000593218 784 ntBASIC17.23■□□□□ 0.35
CDH8P55286 AL138828.2-201ENST00000615812 383 ntBASIC17.23■□□□□ 0.35
CDH8P55286 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDH8P55286 AC008741.2-201ENST00000612792 3115 ntBASIC17.23■□□□□ 0.35
CDH8P55286 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH8P55286 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.23■□□□□ 0.35
CDH8P55286 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDH8P55286 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH8P55286 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.23■□□□□ 0.35
CDH8P55286 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH8P55286 CYP4F24P-201ENST00000586049 1580 ntBASIC17.23■□□□□ 0.35
CDH8P55286 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH8P55286 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH8P55286 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH8P55286 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH8P55286 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.22■□□□□ 0.35
CDH8P55286 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH8P55286 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.22■□□□□ 0.35
CDH8P55286 AP003680.1-201ENST00000598970 3660 ntBASIC17.22■□□□□ 0.35
CDH8P55286 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CDH8P55286 MIR648-201ENST00000385046 94 ntBASIC17.22■□□□□ 0.35
CDH8P55286 RPL37AP1-201ENST00000412502 279 ntBASIC17.22■□□□□ 0.35
CDH8P55286 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.22■□□□□ 0.35
CDH8P55286 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH8P55286 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH8P55286 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH8P55286 AL603832.2-201ENST00000566195 2125 ntBASIC17.22■□□□□ 0.35
CDH8P55286 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH8P55286 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.22■□□□□ 0.35
CDH8P55286 AC026979.3-201ENST00000607315 403 ntBASIC17.22■□□□□ 0.35
CDH8P55286 AL589739.1-201ENST00000607720 493 ntBASIC17.22■□□□□ 0.35
CDH8P55286 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDH8P55286 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDH8P55286 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CDH8P55286 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH8P55286 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH8P55286 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH8P55286 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH8P55286 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH8P55286 BNIP3P1-202ENST00000550043 1585 ntBASIC17.22■□□□□ 0.35
CDH8P55286 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH8P55286 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH8P55286 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH8P55286 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH8P55286 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH8P55286 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.22■□□□□ 0.35
CDH8P55286 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH8P55286 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH8P55286 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH8P55286 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDH8P55286 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH8P55286 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CDH8P55286 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH8P55286 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH8P55286 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CDH8P55286 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH8P55286 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CDH8P55286 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH8P55286 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH8P55286 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH8P55286 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDH8P55286 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDH8P55286 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH8P55286 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH8P55286 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH8P55286 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH8P55286 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
CDH8P55286 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CDH8P55286 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH8P55286 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH8P55286 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH8P55286 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH8P55286 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH8P55286 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH8P55286 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.21■□□□□ 0.35
CDH8P55286 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CDH8P55286 AC055876.3-201ENST00000431496 288 ntBASIC17.21■□□□□ 0.35
CDH8P55286 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH8P55286 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH8P55286 AC027369.6-201ENST00000525520 931 ntBASIC17.21■□□□□ 0.35
CDH8P55286 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH8P55286 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.21■□□□□ 0.35
CDH8P55286 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms