Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIMK2P53671 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIMK2P53671 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LIMK2P53671 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.34■□□□□ 0.21
LIMK2P53671 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.34■□□□□ 0.21
LIMK2P53671 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.34■□□□□ 0.21
LIMK2P53671 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
LIMK2P53671 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.21
LIMK2P53671 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LIMK2P53671 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LIMK2P53671 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LIMK2P53671 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LIMK2P53671 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LIMK2P53671 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LIMK2P53671 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIMK2P53671 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIMK2P53671 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIMK2P53671 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIMK2P53671 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.33■□□□□ 0.2
LIMK2P53671 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.33■□□□□ 0.2
LIMK2P53671 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.33■□□□□ 0.2
LIMK2P53671 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LIMK2P53671 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.33■□□□□ 0.2
LIMK2P53671 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.33■□□□□ 0.2
LIMK2P53671 FAM86C2P-203ENST00000528684 1004 ntBASIC16.33■□□□□ 0.2
LIMK2P53671 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
LIMK2P53671 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.33■□□□□ 0.2
LIMK2P53671 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LIMK2P53671 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIMK2P53671 AC093028.1-201ENST00000622998 982 ntBASIC16.33■□□□□ 0.2
LIMK2P53671 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.33■□□□□ 0.2
LIMK2P53671 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
LIMK2P53671 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.33■□□□□ 0.2
LIMK2P53671 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.33■□□□□ 0.2
LIMK2P53671 AL596257.1-201ENST00000641463 2694 ntBASIC16.33■□□□□ 0.2
LIMK2P53671 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIMK2P53671 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LIMK2P53671 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
LIMK2P53671 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIMK2P53671 AC008677.1-201ENST00000519230 1561 ntBASIC16.33■□□□□ 0.2
LIMK2P53671 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.33■□□□□ 0.2
LIMK2P53671 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIMK2P53671 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.33■□□□□ 0.2
LIMK2P53671 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LIMK2P53671 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LIMK2P53671 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIMK2P53671 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIMK2P53671 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LIMK2P53671 AC126177.1-201ENST00000547829 2218 ntBASIC16.33■□□□□ 0.2
LIMK2P53671 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.32■□□□□ 0.2
LIMK2P53671 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIMK2P53671 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIMK2P53671 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIMK2P53671 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIMK2P53671 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIMK2P53671 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LIMK2P53671 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIMK2P53671 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LIMK2P53671 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIMK2P53671 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.32■□□□□ 0.2
LIMK2P53671 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.32■□□□□ 0.2
LIMK2P53671 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.32■□□□□ 0.2
LIMK2P53671 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.32■□□□□ 0.2
LIMK2P53671 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.32■□□□□ 0.2
LIMK2P53671 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.32■□□□□ 0.2
LIMK2P53671 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.32■□□□□ 0.2
LIMK2P53671 HLA-J-203ENST00000494367 1087 ntBASIC16.32■□□□□ 0.2
LIMK2P53671 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIMK2P53671 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LIMK2P53671 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
LIMK2P53671 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIMK2P53671 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.32■□□□□ 0.2
LIMK2P53671 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
LIMK2P53671 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LIMK2P53671 AC004449.1-201ENST00000564240 433 ntBASIC16.32■□□□□ 0.2
LIMK2P53671 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LIMK2P53671 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.32■□□□□ 0.2
LIMK2P53671 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.32■□□□□ 0.2
LIMK2P53671 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIMK2P53671 AC106028.4-201ENST00000614509 607 ntBASIC16.32■□□□□ 0.2
LIMK2P53671 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LIMK2P53671 HYMAI-201ENST00000635591 3347 ntBASIC16.32■□□□□ 0.2
LIMK2P53671 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LIMK2P53671 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIMK2P53671 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIMK2P53671 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
LIMK2P53671 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK2P53671 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LIMK2P53671 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK2P53671 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.31■□□□□ 0.2
LIMK2P53671 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK2P53671 AL355306.1-201ENST00000415580 579 ntBASIC16.31■□□□□ 0.2
LIMK2P53671 AL671277.1-201ENST00000429656 993 ntBASIC16.31■□□□□ 0.2
LIMK2P53671 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.31■□□□□ 0.2
LIMK2P53671 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK2P53671 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.31■□□□□ 0.2
LIMK2P53671 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK2P53671 AC023141.5-201ENST00000458585 616 ntBASIC16.31■□□□□ 0.2
LIMK2P53671 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.31■□□□□ 0.2
LIMK2P53671 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms