Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGCLP35914 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGCLP35914 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGCLP35914 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HMGCLP35914 BNIP3P1-202ENST00000550043 1585 ntBASIC16.08■□□□□ 0.16
HMGCLP35914 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGCLP35914 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGCLP35914 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.07■□□□□ 0.16
HMGCLP35914 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.07■□□□□ 0.16
HMGCLP35914 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.07■□□□□ 0.16
HMGCLP35914 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.07■□□□□ 0.16
HMGCLP35914 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HMGCLP35914 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
HMGCLP35914 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.07■□□□□ 0.16
HMGCLP35914 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.07■□□□□ 0.16
HMGCLP35914 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.07■□□□□ 0.16
HMGCLP35914 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.07■□□□□ 0.16
HMGCLP35914 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.07■□□□□ 0.16
HMGCLP35914 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 AC067863.1-201ENST00000494933 530 ntBASIC16.07■□□□□ 0.16
HMGCLP35914 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.07■□□□□ 0.16
HMGCLP35914 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.07■□□□□ 0.16
HMGCLP35914 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.07■□□□□ 0.16
HMGCLP35914 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.07■□□□□ 0.16
HMGCLP35914 AC051619.7-201ENST00000568314 623 ntBASIC16.07■□□□□ 0.16
HMGCLP35914 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.07■□□□□ 0.16
HMGCLP35914 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.07■□□□□ 0.16
HMGCLP35914 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
HMGCLP35914 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.07■□□□□ 0.16
HMGCLP35914 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.07■□□□□ 0.16
HMGCLP35914 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.07■□□□□ 0.16
HMGCLP35914 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HMGCLP35914 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HMGCLP35914 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HMGCLP35914 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGCLP35914 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGCLP35914 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGCLP35914 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HMGCLP35914 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGCLP35914 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.06■□□□□ 0.16
HMGCLP35914 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGCLP35914 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGCLP35914 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.06■□□□□ 0.16
HMGCLP35914 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGCLP35914 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.06■□□□□ 0.16
HMGCLP35914 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HMGCLP35914 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.06■□□□□ 0.16
HMGCLP35914 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGCLP35914 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGCLP35914 SPDYE17-201ENST00000412399 783 ntBASIC16.06■□□□□ 0.16
HMGCLP35914 EEF1DP4-201ENST00000446006 880 ntBASIC16.06■□□□□ 0.16
HMGCLP35914 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.06■□□□□ 0.16
HMGCLP35914 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HMGCLP35914 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.06■□□□□ 0.16
HMGCLP35914 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.06■□□□□ 0.16
HMGCLP35914 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
HMGCLP35914 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.06■□□□□ 0.16
HMGCLP35914 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HMGCLP35914 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGCLP35914 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGCLP35914 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGCLP35914 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.06■□□□□ 0.16
HMGCLP35914 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HMGCLP35914 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HMGCLP35914 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HMGCLP35914 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HMGCLP35914 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.05■□□□□ 0.16
HMGCLP35914 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
HMGCLP35914 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HMGCLP35914 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HMGCLP35914 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HMGCLP35914 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
HMGCLP35914 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HMGCLP35914 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms