Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFC1P35251 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.08■□□□□ 0.33
RFC1P35251 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.08■□□□□ 0.33
RFC1P35251 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.08■□□□□ 0.33
RFC1P35251 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFC1P35251 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFC1P35251 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFC1P35251 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RFC1P35251 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC1P35251 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC1P35251 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC1P35251 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RFC1P35251 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.08■□□□□ 0.32
RFC1P35251 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.08■□□□□ 0.32
RFC1P35251 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.08■□□□□ 0.32
RFC1P35251 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.08■□□□□ 0.32
RFC1P35251 SPDYE11-202ENST00000450699 704 ntBASIC17.08■□□□□ 0.32
RFC1P35251 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RFC1P35251 RN7SL589P-201ENST00000481268 310 ntBASIC17.08■□□□□ 0.32
RFC1P35251 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.08■□□□□ 0.32
RFC1P35251 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.08■□□□□ 0.32
RFC1P35251 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.08■□□□□ 0.32
RFC1P35251 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.08■□□□□ 0.32
RFC1P35251 AC005829.1-201ENST00000570002 483 ntBASIC17.08■□□□□ 0.32
RFC1P35251 SPDYE9P-201ENST00000570642 692 ntBASIC17.08■□□□□ 0.32
RFC1P35251 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
RFC1P35251 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.08■□□□□ 0.32
RFC1P35251 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC1P35251 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.08■□□□□ 0.32
RFC1P35251 AL365330.1-201ENST00000607459 531 ntBASIC17.08■□□□□ 0.32
RFC1P35251 SPDYE10P-202ENST00000612005 668 ntBASIC17.08■□□□□ 0.32
RFC1P35251 SPDYE8P-202ENST00000612377 668 ntBASIC17.08■□□□□ 0.32
RFC1P35251 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.08■□□□□ 0.32
RFC1P35251 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.08■□□□□ 0.32
RFC1P35251 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC1P35251 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.08■□□□□ 0.32
RFC1P35251 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC1P35251 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC1P35251 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.08■□□□□ 0.32
RFC1P35251 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.08■□□□□ 0.32
RFC1P35251 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC1P35251 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC1P35251 ELL2P1-201ENST00000413990 1906 ntBASIC17.08■□□□□ 0.32
RFC1P35251 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RFC1P35251 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFC1P35251 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFC1P35251 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
RFC1P35251 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
RFC1P35251 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.07■□□□□ 0.32
RFC1P35251 CICP6-201ENST00000457191 2729 ntBASIC17.07■□□□□ 0.32
RFC1P35251 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFC1P35251 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFC1P35251 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
RFC1P35251 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFC1P35251 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.07■□□□□ 0.32
RFC1P35251 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.07■□□□□ 0.32
RFC1P35251 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFC1P35251 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.07■□□□□ 0.32
RFC1P35251 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.07■□□□□ 0.32
RFC1P35251 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RFC1P35251 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.07■□□□□ 0.32
RFC1P35251 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFC1P35251 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.07■□□□□ 0.32
RFC1P35251 TIMM8BP1-201ENST00000452384 211 ntBASIC17.07■□□□□ 0.32
RFC1P35251 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.07■□□□□ 0.32
RFC1P35251 AC098859.1-201ENST00000502915 1238 ntBASIC17.07■□□□□ 0.32
RFC1P35251 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.07■□□□□ 0.32
RFC1P35251 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.07■□□□□ 0.32
RFC1P35251 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.07■□□□□ 0.32
RFC1P35251 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.07■□□□□ 0.32
RFC1P35251 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.07■□□□□ 0.32
RFC1P35251 SPTSSB-204ENST00000617024 1292 ntBASIC17.07■□□□□ 0.32
RFC1P35251 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.07■□□□□ 0.32
RFC1P35251 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFC1P35251 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFC1P35251 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.07■□□□□ 0.32
RFC1P35251 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.07■□□□□ 0.32
RFC1P35251 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFC1P35251 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFC1P35251 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.07■□□□□ 0.32
RFC1P35251 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFC1P35251 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.07■□□□□ 0.32
RFC1P35251 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
RFC1P35251 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFC1P35251 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFC1P35251 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 AC008677.1-201ENST00000519230 1561 ntBASIC17.06■□□□□ 0.32
RFC1P35251 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.06■□□□□ 0.32
RFC1P35251 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms