Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 AZGP1P1-201ENST00000411909 902 ntBASIC18.14■□□□□ 0.49
CIITAP33076 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.14■□□□□ 0.49
CIITAP33076 AL512638.1-201ENST00000457493 794 ntBASIC18.14■□□□□ 0.49
CIITAP33076 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.14■□□□□ 0.49
CIITAP33076 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.14■□□□□ 0.49
CIITAP33076 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CIITAP33076 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.14■□□□□ 0.49
CIITAP33076 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.14■□□□□ 0.49
CIITAP33076 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
CIITAP33076 AC124067.4-201ENST00000519691 2379 ntBASIC18.14■□□□□ 0.49
CIITAP33076 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CIITAP33076 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.14■□□□□ 0.49
CIITAP33076 CDC14C-201ENST00000428251 1719 ntBASIC18.14■□□□□ 0.49
CIITAP33076 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
CIITAP33076 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.14■□□□□ 0.49
CIITAP33076 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CIITAP33076 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CIITAP33076 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CIITAP33076 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CIITAP33076 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
CIITAP33076 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CIITAP33076 AL603832.2-201ENST00000566195 2125 ntBASIC18.13■□□□□ 0.49
CIITAP33076 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.13■□□□□ 0.49
CIITAP33076 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.13■□□□□ 0.49
CIITAP33076 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.13■□□□□ 0.49
CIITAP33076 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.13■□□□□ 0.49
CIITAP33076 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.13■□□□□ 0.49
CIITAP33076 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.13■□□□□ 0.49
CIITAP33076 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.13■□□□□ 0.49
CIITAP33076 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.13■□□□□ 0.49
CIITAP33076 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.13■□□□□ 0.49
CIITAP33076 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CIITAP33076 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.13■□□□□ 0.49
CIITAP33076 REXO1L1P-202ENST00000608646 1974 ntBASIC18.13■□□□□ 0.49
CIITAP33076 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CIITAP33076 BTBD7P1-201ENST00000447253 1453 ntBASIC18.13■□□□□ 0.49
CIITAP33076 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CIITAP33076 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.13■□□□□ 0.49
CIITAP33076 AC079328.2-201ENST00000561241 3354 ntBASIC18.13■□□□□ 0.49
CIITAP33076 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.13■□□□□ 0.49
CIITAP33076 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CIITAP33076 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.12■□□□□ 0.49
CIITAP33076 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CIITAP33076 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CIITAP33076 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CIITAP33076 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CIITAP33076 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CIITAP33076 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CIITAP33076 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CIITAP33076 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CIITAP33076 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CIITAP33076 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CIITAP33076 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CIITAP33076 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.12■□□□□ 0.49
CIITAP33076 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.12■□□□□ 0.49
CIITAP33076 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.12■□□□□ 0.49
CIITAP33076 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CIITAP33076 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.12■□□□□ 0.49
CIITAP33076 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.12■□□□□ 0.49
CIITAP33076 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.12■□□□□ 0.49
CIITAP33076 AC025048.3-201ENST00000590609 569 ntBASIC18.12■□□□□ 0.49
CIITAP33076 AC008738.7-201ENST00000609744 511 ntBASIC18.12■□□□□ 0.49
CIITAP33076 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.12■□□□□ 0.49
CIITAP33076 AC005702.4-201ENST00000618393 416 ntBASIC18.12■□□□□ 0.49
CIITAP33076 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.12■□□□□ 0.49
CIITAP33076 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CIITAP33076 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms