Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19■□□□□ 0.63
TOP1P11387 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TOP1P11387 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TOP1P11387 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TOP1P11387 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TOP1P11387 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19■□□□□ 0.63
TOP1P11387 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TOP1P11387 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TOP1P11387 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19■□□□□ 0.63
TOP1P11387 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19■□□□□ 0.63
TOP1P11387 AL391005.1-201ENST00000623953 2435 ntBASIC19■□□□□ 0.63
TOP1P11387 AL662844.4-201ENST00000606367 2838 ntBASIC19■□□□□ 0.63
TOP1P11387 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TOP1P11387 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TOP1P11387 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TOP1P11387 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TOP1P11387 BCRP1-201ENST00000444246 691 ntBASIC19■□□□□ 0.63
TOP1P11387 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19■□□□□ 0.63
TOP1P11387 CCDC74BP1-201ENST00000508880 1123 ntBASIC19■□□□□ 0.63
TOP1P11387 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19■□□□□ 0.63
TOP1P11387 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19■□□□□ 0.63
TOP1P11387 AL096865.1-201ENST00000606796 927 ntBASIC19■□□□□ 0.63
TOP1P11387 AL138828.2-201ENST00000615812 383 ntBASIC19■□□□□ 0.63
TOP1P11387 AL390754.1-201ENST00000619088 582 ntBASIC19■□□□□ 0.63
TOP1P11387 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TOP1P11387 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TOP1P11387 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TOP1P11387 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TOP1P11387 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TOP1P11387 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19■□□□□ 0.63
TOP1P11387 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TOP1P11387 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19■□□□□ 0.63
TOP1P11387 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TOP1P11387 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TOP1P11387 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.99■□□□□ 0.63
TOP1P11387 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 REXO1L8P-201ENST00000604378 1897 ntBASIC18.99■□□□□ 0.63
TOP1P11387 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
TOP1P11387 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.99■□□□□ 0.63
TOP1P11387 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.99■□□□□ 0.63
TOP1P11387 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
TOP1P11387 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TOP1P11387 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.99■□□□□ 0.63
TOP1P11387 AC027369.6-201ENST00000525520 931 ntBASIC18.99■□□□□ 0.63
TOP1P11387 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TOP1P11387 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TOP1P11387 AC026979.3-201ENST00000607315 403 ntBASIC18.99■□□□□ 0.63
TOP1P11387 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.99■□□□□ 0.63
TOP1P11387 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.99■□□□□ 0.63
TOP1P11387 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.99■□□□□ 0.63
TOP1P11387 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TOP1P11387 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TOP1P11387 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TOP1P11387 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
TOP1P11387 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.98■□□□□ 0.63
TOP1P11387 CETN4P-206ENST00000642099 2168 ntBASIC18.98■□□□□ 0.63
TOP1P11387 CYP2T1P-202ENST00000641596 2535 ntBASIC18.98■□□□□ 0.63
TOP1P11387 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TOP1P11387 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.98■□□□□ 0.63
TOP1P11387 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.98■□□□□ 0.63
TOP1P11387 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.98■□□□□ 0.63
TOP1P11387 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.98■□□□□ 0.63
TOP1P11387 AL589739.1-201ENST00000607720 493 ntBASIC18.98■□□□□ 0.63
TOP1P11387 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.98■□□□□ 0.63
TOP1P11387 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.98■□□□□ 0.63
TOP1P11387 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TOP1P11387 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms