Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM228BP0C875 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
FAM228BP0C875 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM228BP0C875 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FAM228BP0C875 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM228BP0C875 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.26■□□□□ 0.35
FAM228BP0C875 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.26■□□□□ 0.35
FAM228BP0C875 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
FAM228BP0C875 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.26■□□□□ 0.35
FAM228BP0C875 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.26■□□□□ 0.35
FAM228BP0C875 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.26■□□□□ 0.35
FAM228BP0C875 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FAM228BP0C875 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FAM228BP0C875 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FAM228BP0C875 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
FAM228BP0C875 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.26■□□□□ 0.35
FAM228BP0C875 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM228BP0C875 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.26■□□□□ 0.35
FAM228BP0C875 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM228BP0C875 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM228BP0C875 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FAM228BP0C875 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.26■□□□□ 0.35
FAM228BP0C875 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
FAM228BP0C875 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.26■□□□□ 0.35
FAM228BP0C875 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.25■□□□□ 0.35
FAM228BP0C875 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.25■□□□□ 0.35
FAM228BP0C875 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.25■□□□□ 0.35
FAM228BP0C875 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 PMS2P7-201ENST00000506558 1336 ntBASIC17.25■□□□□ 0.35
FAM228BP0C875 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.25■□□□□ 0.35
FAM228BP0C875 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.25■□□□□ 0.35
FAM228BP0C875 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
FAM228BP0C875 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.25■□□□□ 0.35
FAM228BP0C875 AC007967.2-201ENST00000432613 625 ntBASIC17.25■□□□□ 0.35
FAM228BP0C875 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.25■□□□□ 0.35
FAM228BP0C875 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.25■□□□□ 0.35
FAM228BP0C875 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.25■□□□□ 0.35
FAM228BP0C875 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.25■□□□□ 0.35
FAM228BP0C875 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.25■□□□□ 0.35
FAM228BP0C875 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.25■□□□□ 0.35
FAM228BP0C875 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.25■□□□□ 0.35
FAM228BP0C875 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
FAM228BP0C875 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.25■□□□□ 0.35
FAM228BP0C875 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.25■□□□□ 0.35
FAM228BP0C875 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 TNRC18P2-201ENST00000417666 2714 ntBASIC17.25■□□□□ 0.35
FAM228BP0C875 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FAM228BP0C875 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.24■□□□□ 0.35
FAM228BP0C875 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.24■□□□□ 0.35
FAM228BP0C875 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
FAM228BP0C875 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.24■□□□□ 0.35
FAM228BP0C875 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.24■□□□□ 0.35
FAM228BP0C875 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.24■□□□□ 0.35
FAM228BP0C875 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
FAM228BP0C875 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.24■□□□□ 0.35
FAM228BP0C875 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.24■□□□□ 0.35
FAM228BP0C875 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.24■□□□□ 0.35
FAM228BP0C875 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
FAM228BP0C875 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
FAM228BP0C875 AP001282.1-201ENST00000531301 1499 ntBASIC17.24■□□□□ 0.35
FAM228BP0C875 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FAM228BP0C875 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.23■□□□□ 0.35
FAM228BP0C875 AC092127.1-201ENST00000567093 3455 ntBASIC17.23■□□□□ 0.35
FAM228BP0C875 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
FAM228BP0C875 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FAM228BP0C875 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms