Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CCDC172P0C7W6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC172P0C7W6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC172P0C7W6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC172P0C7W6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC172P0C7W6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC172P0C7W6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC172P0C7W6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC172P0C7W6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC172P0C7W6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC172P0C7W6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC172P0C7W6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC172P0C7W6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.57■□□□□ 0.4
CCDC172P0C7W6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 AC092474.2-201ENST00000424288 719 ntBASIC17.57■□□□□ 0.4
CCDC172P0C7W6 TPM4P1-201ENST00000436100 807 ntBASIC17.57■□□□□ 0.4
CCDC172P0C7W6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 AL365330.1-201ENST00000607459 531 ntBASIC17.57■□□□□ 0.4
CCDC172P0C7W6 Z83851.2-201ENST00000609564 659 ntBASIC17.57■□□□□ 0.4
CCDC172P0C7W6 AC010507.1-201ENST00000633895 436 ntBASIC17.57■□□□□ 0.4
CCDC172P0C7W6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 AC010491.1-201ENST00000563101 2797 ntBASIC17.57■□□□□ 0.4
CCDC172P0C7W6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 AC069224.1-201ENST00000566372 1715 ntBASIC17.57■□□□□ 0.4
CCDC172P0C7W6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC172P0C7W6 CICP4-201ENST00000447359 2812 ntBASIC17.57■□□□□ 0.4
CCDC172P0C7W6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 AC112504.1-201ENST00000623415 1841 ntBASIC17.56■□□□□ 0.4
CCDC172P0C7W6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 AC093724.1-201ENST00000448659 1027 ntBASIC17.56■□□□□ 0.4
CCDC172P0C7W6 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC172P0C7W6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC172P0C7W6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms