Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.49□□□□□ -0.25
CTSDP07339 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.49□□□□□ -0.25
CTSDP07339 AC132008.2-207ENST00000454517 770 ntBASIC13.49□□□□□ -0.25
CTSDP07339 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.49□□□□□ -0.25
CTSDP07339 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.49□□□□□ -0.25
CTSDP07339 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
CTSDP07339 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.49□□□□□ -0.25
CTSDP07339 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.49□□□□□ -0.25
CTSDP07339 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.49□□□□□ -0.25
CTSDP07339 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.49□□□□□ -0.25
CTSDP07339 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CTSDP07339 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
CTSDP07339 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CTSDP07339 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 PCDHA3-202ENST00000532566 4594 ntBASIC13.49□□□□□ -0.25
CTSDP07339 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CTSDP07339 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.48□□□□□ -0.25
CTSDP07339 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.48□□□□□ -0.25
CTSDP07339 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CTSDP07339 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CTSDP07339 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.48□□□□□ -0.25
CTSDP07339 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.48□□□□□ -0.25
CTSDP07339 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CTSDP07339 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CTSDP07339 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.48□□□□□ -0.25
CTSDP07339 RBM17P3-201ENST00000417687 1192 ntBASIC13.48□□□□□ -0.25
CTSDP07339 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.48□□□□□ -0.25
CTSDP07339 UPK3BP1-201ENST00000428678 509 ntBASIC13.48□□□□□ -0.25
CTSDP07339 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 KRT16P4-201ENST00000453883 522 ntBASIC13.48□□□□□ -0.25
CTSDP07339 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.48□□□□□ -0.25
CTSDP07339 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.48□□□□□ -0.25
CTSDP07339 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.48□□□□□ -0.25
CTSDP07339 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.48□□□□□ -0.25
CTSDP07339 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.48□□□□□ -0.25
CTSDP07339 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.48□□□□□ -0.25
CTSDP07339 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.48□□□□□ -0.25
CTSDP07339 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CTSDP07339 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CTSDP07339 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.48□□□□□ -0.25
CTSDP07339 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CTSDP07339 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.48□□□□□ -0.25
CTSDP07339 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 AC007292.2-201ENST00000593524 1812 ntBASIC13.48□□□□□ -0.25
CTSDP07339 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 TCAF2P1-201ENST00000291129 2421 ntBASIC13.48□□□□□ -0.25
CTSDP07339 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CTSDP07339 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CTSDP07339 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.47□□□□□ -0.25
CTSDP07339 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.47□□□□□ -0.25
CTSDP07339 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CTSDP07339 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.47□□□□□ -0.25
CTSDP07339 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CTSDP07339 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.47□□□□□ -0.25
CTSDP07339 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms