Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 AL139400.1-201ENST00000366220 510 ntBASIC16.38■□□□□ 0.21
HLA-DQB2P05538 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.38■□□□□ 0.21
HLA-DQB2P05538 AC109322.1-201ENST00000524499 1264 ntBASIC16.38■□□□□ 0.21
HLA-DQB2P05538 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 AP001059.3-201ENST00000619053 235 ntBASIC16.38■□□□□ 0.21
HLA-DQB2P05538 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 LINC00628-201ENST00000628516 1289 ntBASIC16.38■□□□□ 0.21
HLA-DQB2P05538 PAUPAR-201ENST00000630360 2965 ntBASIC16.38■□□□□ 0.21
HLA-DQB2P05538 AC079781.4-201ENST00000641908 219 ntBASIC16.38■□□□□ 0.21
HLA-DQB2P05538 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQB2P05538 AC132872.4-202ENST00000622924 2756 ntBASIC16.38■□□□□ 0.21
HLA-DQB2P05538 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 TSEN15P1-201ENST00000423257 515 ntBASIC16.37■□□□□ 0.21
HLA-DQB2P05538 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 AC243562.2-201ENST00000561247 970 ntBASIC16.37■□□□□ 0.21
HLA-DQB2P05538 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 AC003101.2-201ENST00000612557 442 ntBASIC16.37■□□□□ 0.21
HLA-DQB2P05538 MIR6080-201ENST00000617359 66 ntBASIC16.37■□□□□ 0.21
HLA-DQB2P05538 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 BNIP3P1-202ENST00000550043 1585 ntBASIC16.37■□□□□ 0.21
HLA-DQB2P05538 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DQB2P05538 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 CYP4F24P-201ENST00000586049 1580 ntBASIC16.36■□□□□ 0.21
HLA-DQB2P05538 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms