Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.24■□□□□ 0.35
TIMP1P01033 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TIMP1P01033 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 DRD5P1-201ENST00000456605 1438 ntBASIC17.24■□□□□ 0.35
TIMP1P01033 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.24■□□□□ 0.35
TIMP1P01033 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.24■□□□□ 0.35
TIMP1P01033 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.24■□□□□ 0.35
TIMP1P01033 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 AC136604.1-201ENST00000418535 575 ntBASIC17.24■□□□□ 0.35
TIMP1P01033 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.24■□□□□ 0.35
TIMP1P01033 BX284668.4-201ENST00000453917 508 ntBASIC17.24■□□□□ 0.35
TIMP1P01033 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.24■□□□□ 0.35
TIMP1P01033 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.24■□□□□ 0.35
TIMP1P01033 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.24■□□□□ 0.35
TIMP1P01033 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.24■□□□□ 0.35
TIMP1P01033 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TIMP1P01033 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.24■□□□□ 0.35
TIMP1P01033 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.24■□□□□ 0.35
TIMP1P01033 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.24■□□□□ 0.35
TIMP1P01033 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TIMP1P01033 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TIMP1P01033 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.24■□□□□ 0.35
TIMP1P01033 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.24■□□□□ 0.35
TIMP1P01033 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.24■□□□□ 0.35
TIMP1P01033 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.24■□□□□ 0.35
TIMP1P01033 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TIMP1P01033 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.24■□□□□ 0.35
TIMP1P01033 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TIMP1P01033 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.23■□□□□ 0.35
TIMP1P01033 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.23■□□□□ 0.35
TIMP1P01033 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 AC009053.2-201ENST00000563701 2365 ntBASIC17.23■□□□□ 0.35
TIMP1P01033 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 AL121723.1-201ENST00000445194 1519 ntBASIC17.23■□□□□ 0.35
TIMP1P01033 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 PP12613-201ENST00000424958 2230 ntBASIC17.23■□□□□ 0.35
TIMP1P01033 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TIMP1P01033 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TIMP1P01033 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TIMP1P01033 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.23■□□□□ 0.35
TIMP1P01033 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TIMP1P01033 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.23■□□□□ 0.35
TIMP1P01033 KRT18P43-201ENST00000469825 1281 ntBASIC17.23■□□□□ 0.35
TIMP1P01033 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.23■□□□□ 0.35
TIMP1P01033 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.23■□□□□ 0.35
TIMP1P01033 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.23■□□□□ 0.35
TIMP1P01033 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.23■□□□□ 0.35
TIMP1P01033 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.23■□□□□ 0.35
TIMP1P01033 AC104982.3-201ENST00000581995 514 ntBASIC17.23■□□□□ 0.35
TIMP1P01033 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.23■□□□□ 0.35
TIMP1P01033 AC020914.3-201ENST00000594712 304 ntBASIC17.23■□□□□ 0.35
TIMP1P01033 AC132938.4-201ENST00000623835 848 ntBASIC17.23■□□□□ 0.35
TIMP1P01033 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TIMP1P01033 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.23■□□□□ 0.35
TIMP1P01033 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMP1P01033 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.23■□□□□ 0.35
TIMP1P01033 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.23■□□□□ 0.35
TIMP1P01033 AC060834.1-201ENST00000443027 2032 ntBASIC17.23■□□□□ 0.35
TIMP1P01033 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.23■□□□□ 0.35
TIMP1P01033 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.23■□□□□ 0.35
TIMP1P01033 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.23■□□□□ 0.35
TIMP1P01033 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TIMP1P01033 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMP1P01033 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TIMP1P01033 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMP1P01033 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.22■□□□□ 0.35
TIMP1P01033 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TIMP1P01033 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMP1P01033 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TIMP1P01033 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMP1P01033 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.22■□□□□ 0.35
TIMP1P01033 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
TIMP1P01033 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms