Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.82■□□□□ 0.28
LRCH4O75427 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.82■□□□□ 0.28
LRCH4O75427 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.82■□□□□ 0.28
LRCH4O75427 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRCH4O75427 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.82■□□□□ 0.28
LRCH4O75427 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.82■□□□□ 0.28
LRCH4O75427 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LRCH4O75427 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRCH4O75427 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH4O75427 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH4O75427 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
LRCH4O75427 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH4O75427 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH4O75427 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LRCH4O75427 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.81■□□□□ 0.28
LRCH4O75427 KRT18P13-201ENST00000400056 1290 ntBASIC16.81■□□□□ 0.28
LRCH4O75427 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.81■□□□□ 0.28
LRCH4O75427 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.81■□□□□ 0.28
LRCH4O75427 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.81■□□□□ 0.28
LRCH4O75427 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.81■□□□□ 0.28
LRCH4O75427 AC112482.1-201ENST00000492080 688 ntBASIC16.81■□□□□ 0.28
LRCH4O75427 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.81■□□□□ 0.28
LRCH4O75427 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.81■□□□□ 0.28
LRCH4O75427 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH4O75427 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.81■□□□□ 0.28
LRCH4O75427 AC093520.2-201ENST00000561830 333 ntBASIC16.81■□□□□ 0.28
LRCH4O75427 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.81■□□□□ 0.28
LRCH4O75427 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.81■□□□□ 0.28
LRCH4O75427 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LRCH4O75427 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 AL136982.4-201ENST00000437689 1740 ntBASIC16.81■□□□□ 0.28
LRCH4O75427 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRCH4O75427 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRCH4O75427 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH4O75427 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LRCH4O75427 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
LRCH4O75427 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
LRCH4O75427 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LRCH4O75427 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH4O75427 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH4O75427 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH4O75427 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRCH4O75427 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH4O75427 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH4O75427 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.8■□□□□ 0.28
LRCH4O75427 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH4O75427 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH4O75427 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
LRCH4O75427 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
LRCH4O75427 AC004461.1-201ENST00000412461 403 ntBASIC16.8■□□□□ 0.28
LRCH4O75427 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
LRCH4O75427 RPS8P6-201ENST00000426177 609 ntBASIC16.8■□□□□ 0.28
LRCH4O75427 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.8■□□□□ 0.28
LRCH4O75427 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH4O75427 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.8■□□□□ 0.28
LRCH4O75427 AC243562.2-201ENST00000561247 970 ntBASIC16.8■□□□□ 0.28
LRCH4O75427 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.8■□□□□ 0.28
LRCH4O75427 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH4O75427 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.8■□□□□ 0.28
LRCH4O75427 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
LRCH4O75427 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
LRCH4O75427 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRCH4O75427 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH4O75427 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
LRCH4O75427 BNIP3P1-202ENST00000550043 1585 ntBASIC16.8■□□□□ 0.28
LRCH4O75427 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
LRCH4O75427 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRCH4O75427 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.8■□□□□ 0.28
LRCH4O75427 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH4O75427 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.8■□□□□ 0.28
LRCH4O75427 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms