Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SPDYE11-202ENST00000450699 704 ntBASIC15.2■□□□□ 0.02
HCN1O60741 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.2■□□□□ 0.02
HCN1O60741 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
HCN1O60741 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.2■□□□□ 0.02
HCN1O60741 AC087641.1-201ENST00000557561 1021 ntBASIC15.2■□□□□ 0.02
HCN1O60741 SPDYE9P-201ENST00000570642 692 ntBASIC15.2■□□□□ 0.02
HCN1O60741 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCN1O60741 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.2■□□□□ 0.02
HCN1O60741 MIR3909-201ENST00000579518 119 ntBASIC15.2■□□□□ 0.02
HCN1O60741 AC022145.2-201ENST00000598203 171 ntBASIC15.2■□□□□ 0.02
HCN1O60741 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.2■□□□□ 0.02
HCN1O60741 SPDYE10P-202ENST00000612005 668 ntBASIC15.2■□□□□ 0.02
HCN1O60741 SPDYE8P-202ENST00000612377 668 ntBASIC15.2■□□□□ 0.02
HCN1O60741 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.2■□□□□ 0.02
HCN1O60741 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.2■□□□□ 0.02
HCN1O60741 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
HCN1O60741 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCN1O60741 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCN1O60741 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCN1O60741 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCN1O60741 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCN1O60741 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCN1O60741 PAUPAR-201ENST00000630360 2965 ntBASIC15.2■□□□□ 0.02
HCN1O60741 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCN1O60741 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
HCN1O60741 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCN1O60741 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HCN1O60741 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HCN1O60741 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.19■□□□□ 0.02
HCN1O60741 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.19■□□□□ 0.02
HCN1O60741 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.19■□□□□ 0.02
HCN1O60741 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.19■□□□□ 0.02
HCN1O60741 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
HCN1O60741 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.19■□□□□ 0.02
HCN1O60741 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.19■□□□□ 0.02
HCN1O60741 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HCN1O60741 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.19■□□□□ 0.02
HCN1O60741 RARRES2P8-201ENST00000566335 367 ntBASIC15.19■□□□□ 0.02
HCN1O60741 AC027796.2-201ENST00000575326 344 ntBASIC15.19■□□□□ 0.02
HCN1O60741 AL009183.1-201ENST00000603760 355 ntBASIC15.19■□□□□ 0.02
HCN1O60741 AC027612.4-201ENST00000605371 583 ntBASIC15.19■□□□□ 0.02
HCN1O60741 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.19■□□□□ 0.02
HCN1O60741 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.19■□□□□ 0.02
HCN1O60741 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.19■□□□□ 0.02
HCN1O60741 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.19■□□□□ 0.02
HCN1O60741 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.19■□□□□ 0.02
HCN1O60741 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCN1O60741 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
HCN1O60741 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HCN1O60741 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.18■□□□□ 0.02
HCN1O60741 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.18■□□□□ 0.02
HCN1O60741 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.18■□□□□ 0.02
HCN1O60741 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.18■□□□□ 0.02
HCN1O60741 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
HCN1O60741 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
HCN1O60741 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.18■□□□□ 0.02
HCN1O60741 TSEN15P1-201ENST00000423257 515 ntBASIC15.18■□□□□ 0.02
HCN1O60741 AL645939.2-201ENST00000427340 991 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms