Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PRKNO60260 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PRKNO60260 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRKNO60260 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.06■□□□□ 0
PRKNO60260 DOC2GP-204ENST00000639052 2548 ntBASIC15.06■□□□□ 0
PRKNO60260 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PRKNO60260 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.06■□□□□ 0
PRKNO60260 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.06■□□□□ 0
PRKNO60260 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRKNO60260 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRKNO60260 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
PRKNO60260 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
PRKNO60260 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
PRKNO60260 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.05■□□□□ 0
PRKNO60260 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.05■□□□□ 0
PRKNO60260 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
PRKNO60260 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PRKNO60260 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PRKNO60260 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.05■□□□□ 0
PRKNO60260 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.05■□□□□ 0
PRKNO60260 AC010491.1-201ENST00000563101 2797 ntBASIC15.05■□□□□ 0
PRKNO60260 AC132872.4-202ENST00000622924 2756 ntBASIC15.05■□□□□ 0
PRKNO60260 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
PRKNO60260 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PRKNO60260 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.05■□□□□ 0
PRKNO60260 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
PRKNO60260 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
PRKNO60260 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
PRKNO60260 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.05■□□□□ -0
PRKNO60260 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.05■□□□□ -0
PRKNO60260 AL353705.2-201ENST00000428243 662 ntBASIC15.05■□□□□ -0
PRKNO60260 AC055876.3-201ENST00000431496 288 ntBASIC15.05■□□□□ -0
PRKNO60260 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
PRKNO60260 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.05■□□□□ -0
PRKNO60260 AC097493.3-201ENST00000509725 367 ntBASIC15.05■□□□□ -0
PRKNO60260 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.05■□□□□ -0
PRKNO60260 AC069120.2-201ENST00000524091 540 ntBASIC15.05■□□□□ -0
PRKNO60260 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.05■□□□□ -0
PRKNO60260 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.05■□□□□ -0
PRKNO60260 AC105021.1-202ENST00000570572 669 ntBASIC15.05■□□□□ -0
PRKNO60260 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.05■□□□□ -0
PRKNO60260 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.05■□□□□ -0
PRKNO60260 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.05■□□□□ -0
PRKNO60260 AC138649.4-201ENST00000612222 287 ntBASIC15.05■□□□□ -0
PRKNO60260 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.05■□□□□ -0
PRKNO60260 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PRKNO60260 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PRKNO60260 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.05■□□□□ -0
PRKNO60260 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.05■□□□□ -0
PRKNO60260 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.05■□□□□ -0
PRKNO60260 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PRKNO60260 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.05■□□□□ -0
PRKNO60260 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.05■□□□□ -0
PRKNO60260 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.05■□□□□ -0
PRKNO60260 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRKNO60260 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.05■□□□□ -0
PRKNO60260 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PRKNO60260 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PRKNO60260 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.04■□□□□ -0
PRKNO60260 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.04■□□□□ -0
PRKNO60260 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PRKNO60260 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRKNO60260 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.04■□□□□ -0
PRKNO60260 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
PRKNO60260 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PRKNO60260 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PRKNO60260 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.04■□□□□ -0
PRKNO60260 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.04■□□□□ -0
PRKNO60260 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.04■□□□□ -0
PRKNO60260 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.04■□□□□ -0
PRKNO60260 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRKNO60260 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.04■□□□□ -0
PRKNO60260 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRKNO60260 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
PRKNO60260 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRKNO60260 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PRKNO60260 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
PRKNO60260 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PRKNO60260 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.04■□□□□ -0
PRKNO60260 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.04■□□□□ -0
PRKNO60260 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.04■□□□□ -0
PRKNO60260 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PRKNO60260 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.04■□□□□ -0
PRKNO60260 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.04■□□□□ -0
PRKNO60260 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms