Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.14■□□□□ 0.49
ACTN4O43707 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.14■□□□□ 0.49
ACTN4O43707 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ACTN4O43707 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ACTN4O43707 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.14■□□□□ 0.49
ACTN4O43707 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.14■□□□□ 0.49
ACTN4O43707 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.14■□□□□ 0.49
ACTN4O43707 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ACTN4O43707 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.14■□□□□ 0.49
ACTN4O43707 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.14■□□□□ 0.49
ACTN4O43707 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.14■□□□□ 0.49
ACTN4O43707 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.14■□□□□ 0.49
ACTN4O43707 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.14■□□□□ 0.49
ACTN4O43707 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.14■□□□□ 0.49
ACTN4O43707 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.14■□□□□ 0.49
ACTN4O43707 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ACTN4O43707 AC092902.6-201ENST00000641783 218 ntBASIC18.14■□□□□ 0.49
ACTN4O43707 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ACTN4O43707 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ACTN4O43707 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ACTN4O43707 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 AL596257.1-201ENST00000641463 2694 ntBASIC18.14■□□□□ 0.49
ACTN4O43707 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.14■□□□□ 0.49
ACTN4O43707 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.14■□□□□ 0.49
ACTN4O43707 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACTN4O43707 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.14■□□□□ 0.49
ACTN4O43707 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.13■□□□□ 0.49
ACTN4O43707 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACTN4O43707 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
ACTN4O43707 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.13■□□□□ 0.49
ACTN4O43707 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
ACTN4O43707 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACTN4O43707 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ACTN4O43707 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACTN4O43707 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ACTN4O43707 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.13■□□□□ 0.49
ACTN4O43707 AC092850.2-201ENST00000623821 2697 ntBASIC18.13■□□□□ 0.49
ACTN4O43707 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.13■□□□□ 0.49
ACTN4O43707 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ACTN4O43707 AC023274.1-201ENST00000418278 595 ntBASIC18.13■□□□□ 0.49
ACTN4O43707 AC142381.1-201ENST00000426099 345 ntBASIC18.13■□□□□ 0.49
ACTN4O43707 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
ACTN4O43707 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
ACTN4O43707 AC098859.1-201ENST00000502915 1238 ntBASIC18.13■□□□□ 0.49
ACTN4O43707 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACTN4O43707 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.13■□□□□ 0.49
ACTN4O43707 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
ACTN4O43707 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACTN4O43707 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ACTN4O43707 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ACTN4O43707 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
ACTN4O43707 AL135744.1-201ENST00000565098 629 ntBASIC18.13■□□□□ 0.49
ACTN4O43707 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
ACTN4O43707 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ACTN4O43707 AKAP8P1-201ENST00000434743 1349 ntBASIC18.13■□□□□ 0.49
ACTN4O43707 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACTN4O43707 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.13■□□□□ 0.49
ACTN4O43707 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
ACTN4O43707 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.13■□□□□ 0.49
ACTN4O43707 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ACTN4O43707 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACTN4O43707 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ACTN4O43707 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACTN4O43707 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACTN4O43707 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ACTN4O43707 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
ACTN4O43707 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ACTN4O43707 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.13■□□□□ 0.49
ACTN4O43707 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACTN4O43707 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.12■□□□□ 0.49
ACTN4O43707 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.12■□□□□ 0.49
ACTN4O43707 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ACTN4O43707 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.12■□□□□ 0.49
ACTN4O43707 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.12■□□□□ 0.49
ACTN4O43707 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ACTN4O43707 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ACTN4O43707 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.12■□□□□ 0.49
ACTN4O43707 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms