Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC28A1O00337 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC28A1O00337 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC28A1O00337 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC28A1O00337 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.61■□□□□ 0.09
SLC28A1O00337 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.61■□□□□ 0.09
SLC28A1O00337 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SLC28A1O00337 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC28A1O00337 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.61■□□□□ 0.09
SLC28A1O00337 SLC25A6P4-201ENST00000586535 553 ntBASIC15.61■□□□□ 0.09
SLC28A1O00337 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC28A1O00337 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC28A1O00337 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SLC28A1O00337 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A1O00337 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A1O00337 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC28A1O00337 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A1O00337 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SLC28A1O00337 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A1O00337 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A1O00337 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC28A1O00337 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A1O00337 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC28A1O00337 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A1O00337 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A1O00337 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A1O00337 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC28A1O00337 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.61■□□□□ 0.09
SLC28A1O00337 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC28A1O00337 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC28A1O00337 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
SLC28A1O00337 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SLC28A1O00337 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SLC28A1O00337 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
SLC28A1O00337 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 WASH6P-202ENST00000359512 1437 ntBASIC15.6■□□□□ 0.09
SLC28A1O00337 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC28A1O00337 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SLC28A1O00337 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC28A1O00337 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SLC28A1O00337 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SLC28A1O00337 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC28A1O00337 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC28A1O00337 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC28A1O00337 PRYP6-201ENST00000514804 343 ntBASIC15.6■□□□□ 0.09
SLC28A1O00337 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC28A1O00337 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.6■□□□□ 0.09
SLC28A1O00337 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC28A1O00337 KRT126P-201ENST00000549467 1181 ntBASIC15.6■□□□□ 0.09
SLC28A1O00337 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.6■□□□□ 0.09
SLC28A1O00337 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.6■□□□□ 0.09
SLC28A1O00337 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.6■□□□□ 0.09
SLC28A1O00337 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC28A1O00337 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 HYMAI-201ENST00000635591 3347 ntBASIC15.6■□□□□ 0.09
SLC28A1O00337 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC28A1O00337 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
SLC28A1O00337 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC28A1O00337 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A1O00337 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC28A1O00337 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC28A1O00337 AP001282.1-201ENST00000531301 1499 ntBASIC15.59■□□□□ 0.09
SLC28A1O00337 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A1O00337 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A1O00337 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC28A1O00337 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A1O00337 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A1O00337 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A1O00337 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC28A1O00337 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A1O00337 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SLC28A1O00337 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A1O00337 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A1O00337 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A1O00337 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A1O00337 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC28A1O00337 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.59■□□□□ 0.09
SLC28A1O00337 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC28A1O00337 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC28A1O00337 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms