Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 KRT8P50-201ENST00000562022 1438 ntBASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
CHKB-CPT1BH3BT56 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 AL163051.1-201ENST00000569214 1512 ntBASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 NRAP-203ENST00000369358 5534 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 URB2-201ENST00000258243 5613 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 TFG-210ENST00000620299 1289 ntTSL 5 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 CICP11-201ENST00000434745 2827 ntBASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 SLC6A4-203ENST00000401766 6543 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 OTOG-201ENST00000342528 4992 ntTSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 OS9-204ENST00000389146 2091 ntTSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CHKB-CPT1BH3BT56 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 AC093525.9-201ENST00000624961 1746 ntBASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 KLHL3-207ENST00000506491 6566 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
CHKB-CPT1BH3BT56 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms