Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 AL136982.4-201ENST00000437689 1740 ntBASIC14.28□□□□□ -0.12
NPIPB4C9JG80 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 KRT8P37-201ENST00000451609 1420 ntBASIC14.28□□□□□ -0.12
NPIPB4C9JG80 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB4C9JG80 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB4C9JG80 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 AL627223.1-201ENST00000416693 442 ntBASIC14.27□□□□□ -0.13
NPIPB4C9JG80 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 AL353705.2-201ENST00000428243 662 ntBASIC14.27□□□□□ -0.13
NPIPB4C9JG80 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 ALG1L8P-201ENST00000533887 760 ntBASIC14.27□□□□□ -0.13
NPIPB4C9JG80 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 MIR3687-2-201ENST00000577708 61 ntBASIC14.27□□□□□ -0.13
NPIPB4C9JG80 MIR4469-201ENST00000583919 79 ntBASIC14.27□□□□□ -0.13
NPIPB4C9JG80 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 MIR3687-1-201ENST00000614492 61 ntBASIC14.27□□□□□ -0.13
NPIPB4C9JG80 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB4C9JG80 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NPIPB4C9JG80 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPB4C9JG80 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB4C9JG80 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB4C9JG80 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB4C9JG80 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB4C9JG80 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.26□□□□□ -0.13
NPIPB4C9JG80 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB4C9JG80 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB4C9JG80 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB4C9JG80 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPB4C9JG80 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB4C9JG80 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPB4C9JG80 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPB4C9JG80 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms